RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 GJB4Q9NTQ9 266 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 ATRNO75882 1429 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 A0A1B0GVL5 298 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 A0A1W2PQ27 194 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 A0A1W2PQ64 194 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 A0A1W2PQD8 194 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 BECN2A8MW95 431 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 PDE8BO95263 885 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 ERCC4Q92889 916 aaPredicted RBP27.26■■□□□ 1.95
NDEL1-201ENST00000334527 ZBTB1Q9Y2K1 713 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 BRAPQ7Z569 592 aa27.25■■□□□ 1.95
NDEL1-201ENST00000334527 KCNG4Q8TDN1 519 aa27.25■■□□□ 1.95
NDEL1-201ENST00000334527 TSC1Q92574 1164 aa27.25■■□□□ 1.95
NDEL1-201ENST00000334527 DENND2AQ9ULE3 1009 aa27.25■■□□□ 1.95
NDEL1-201ENST00000334527 APPP05067 770 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 CCDC144BQ3MJ40 725 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 MYSM1Q5VVJ2 828 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 TBC1D10CQ8IV04 446 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 CCDC144CPQ8IYA2 1237 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 POLR3EQ9NVU0 708 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 YEATS4O95619 227 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 NDUFA8P51970 172 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 DHX40Q8IX18 779 aaKnown RBP27.24■■□□□ 1.95
NDEL1-201ENST00000334527 SDF4Q9BRK5 362 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 MYO5AQ9Y4I1 1855 aaKnown RBP27.24■■□□□ 1.95
NDEL1-201ENST00000334527 C4AP0C0L4 1744 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 C4BP0C0L5 1744 aa27.24■■□□□ 1.95
NDEL1-201ENST00000334527 BCL9O00512 1426 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 ZNF532Q9HCE3 1301 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 PDE8AO60658 829 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 PHKA1P46020 1223 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 CCDC102BQ68D86 513 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 ANGEL1Q9UNK9 670 aaKnown RBP27.23■■□□□ 1.95
NDEL1-201ENST00000334527 UBE3CQ15386 1083 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 CEP57L1Q8IYX8 460 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 MRFAP1L1Q96HT8 127 aa27.23■■□□□ 1.95
NDEL1-201ENST00000334527 KIF28PB7ZC32 967 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 SPTLC2O15270 562 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 CYB5R4Q7L1T6 521 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 CACTINQ8WUQ7 758 aaKnown RBP27.22■■□□□ 1.95
NDEL1-201ENST00000334527 SYNE3Q6ZMZ3 975 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 NKX2-3Q8TAU0 364 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 FBXW7Q969H0 707 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 TBC1D2BQ9UPU7 963 aa27.22■■□□□ 1.95
NDEL1-201ENST00000334527 NUP98P52948 1817 aa27.21■■□□□ 1.95
NDEL1-201ENST00000334527 ZMYM6O95789 1325 aa27.21■■□□□ 1.95
NDEL1-201ENST00000334527 PDE6AP16499 860 aa27.21■■□□□ 1.95
NDEL1-201ENST00000334527 KIF23Q02241 960 aaPredicted RBP27.21■■□□□ 1.95
NDEL1-201ENST00000334527 ARID4AP29374 1257 aaPredicted RBP27.21■■□□□ 1.95
NDEL1-201ENST00000334527 AOPEPQ8N6M6 819 aa27.2■■□□□ 1.95
NDEL1-201ENST00000334527 SYTL4Q96C24 671 aaPredicted RBP27.2■■□□□ 1.95
NDEL1-201ENST00000334527 NAT10Q9H0A0 1025 aaKnown RBP27.2■■□□□ 1.95
NDEL1-201ENST00000334527 WWC3Q9ULE0 1092 aa27.2■■□□□ 1.95
NDEL1-201ENST00000334527 STRCQ7RTU9 1775 aa27.2■■□□□ 1.95
NDEL1-201ENST00000334527 KAT6BQ8WYB5 2073 aa27.2■■□□□ 1.94
NDEL1-201ENST00000334527 SH2B2O14492 632 aaPredicted RBP27.2■■□□□ 1.94
NDEL1-201ENST00000334527 UQCRFS1P1P0C7P4 283 aa27.2■■□□□ 1.94
NDEL1-201ENST00000334527 METAP2P50579 478 aaKnown RBP eCLIP27.2■■□□□ 1.94
NDEL1-201ENST00000334527 DZIP3Q86Y13 1208 aaKnown RBP27.2■■□□□ 1.94
NDEL1-201ENST00000334527 NHSL1Q5SYE7 1610 aa27.19■■□□□ 1.94
NDEL1-201ENST00000334527 PUM3Q15397 648 aaKnown RBP27.19■■□□□ 1.94
NDEL1-201ENST00000334527 HELBQ8NG08 1087 aaPredicted RBP27.19■■□□□ 1.94
NDEL1-201ENST00000334527 UBN2Q6ZU65 1347 aa27.19■■□□□ 1.94
NDEL1-201ENST00000334527 RIOK3O14730 519 aaKnown RBP27.19■■□□□ 1.94
NDEL1-201ENST00000334527 ANO1Q5XXA6 986 aa27.19■■□□□ 1.94
NDEL1-201ENST00000334527 TCRBV5S4A2TA0A5A2 114 aa27.18■■□□□ 1.94
NDEL1-201ENST00000334527 B4E1Z4 1266 aa27.18■■□□□ 1.94
NDEL1-201ENST00000334527 RXRAP19793 462 aa27.18■■□□□ 1.94
NDEL1-201ENST00000334527 DISP2A7MBM2 1401 aa27.18■■□□□ 1.94
NDEL1-201ENST00000334527 ERVV-1B6SEH8 477 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 LPIN2Q92539 896 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 AIDAQ96BJ3 306 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 AIFM3Q96NN9 605 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 ALG1Q9BT22 464 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 KIAA1468Q9P260 1216 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 FAM177BA6PVY3 158 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 APOA5Q6Q788 366 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 ZNF710Q8N1W2 664 aa27.17■■□□□ 1.94
NDEL1-201ENST00000334527 C16orf45Q96MC5 204 aaPredicted RBP27.17■■□□□ 1.94
NDEL1-201ENST00000334527 CDKL5O76039 1030 aa27.16■■□□□ 1.94
NDEL1-201ENST00000334527 ZRSR1Q15695 479 aaKnown RBP27.16■■□□□ 1.94
NDEL1-201ENST00000334527 LRRC8AQ8IWT6 810 aa27.16■■□□□ 1.94
NDEL1-201ENST00000334527 STRBPQ96SI9 672 aaKnown RBP27.16■■□□□ 1.94
NDEL1-201ENST00000334527 MROH5Q6ZUA9 1318 aa27.16■■□□□ 1.94
NDEL1-201ENST00000334527 SENP2Q9HC62 589 aa27.16■■□□□ 1.94
NDEL1-201ENST00000334527 NEDD4P46934 1319 aa27.16■■□□□ 1.94
NDEL1-201ENST00000334527 FGFR2P21802 821 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 IL6STP40189 918 aaPredicted RBP27.15■■□□□ 1.94
NDEL1-201ENST00000334527 MICU3Q86XE3 530 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 ZNF34Q8IZ26 560 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 RGS22Q8NE09 1264 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 TMEM87BQ96K49 555 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 TAOK2Q9UL54 1235 aa27.15■■□□□ 1.94
NDEL1-201ENST00000334527 LRP5O75197 1615 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 ZNF202O95125 648 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 CDC27P30260 824 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 ARID5BQ14865 1188 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 DPCR1Q3MIW9 517 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 AXDND1Q5T1B0 1012 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms