RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 USH1CQ9Y6N9 552 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 ATAD2Q6PL18 1390 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 NPHP3Q7Z494 1330 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 A0A1B0GVL5 298 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 MIER3Q7Z3K6 550 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 TRIM75PA6NK02 468 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
COL4A6-201ENST00000334504 HHATQ5VTY9 493 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 CBX8Q9HC52 389 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 STARD3NLO95772 234 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
COL4A6-201ENST00000334504 IFIT1BQ5T764 474 aaKnown RBP11□□□□□ -0.65
COL4A6-201ENST00000334504 KRT23Q9C075 422 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 SPATS2LQ9NUQ6 558 aaKnown RBP11□□□□□ -0.65
COL4A6-201ENST00000334504 PFDN1O60925 122 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 SEC24BO95487 1268 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 INF2Q27J81 1249 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 MORC4Q8TE76 937 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 RAB3IPQ96QF0 476 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-201ENST00000334504 FANCCQ00597 558 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 CCDC65Q8IXS2 484 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 ZNF622Q969S3 477 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL4A6-201ENST00000334504 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 CASKIN1Q8WXD9 1431 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 PPP1R21Q6ZMI0 780 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 KLHL7Q8IXQ5 586 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 VPS16Q9H269 839 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 SATB1Q01826 763 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 SNCBQ16143 134 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 MGARPQ8TDB4 240 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-201ENST00000334504 GDAP1L1Q96MZ0 367 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 PPFIA4O75335 1185 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 RBBP5Q15291 538 aaKnown RBP10.99□□□□□ -0.65
COL4A6-201ENST00000334504 CCDC14Q49A88 953 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 PRR16Q569H4 304 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 SECISBP2LQ93073 1101 aaKnown RBP10.99□□□□□ -0.65
COL4A6-201ENST00000334504 PLIN2Q99541 437 aa10.99□□□□□ -0.65
COL4A6-201ENST00000334504 SLC8A1P32418 973 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 PAK2Q13177 524 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 DPH6Q7L8W6 267 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 ELP1O95163 1332 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 CRCPO75575 148 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 TRIM14Q14142 442 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 PLCB1Q9NQ66 1216 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 PFDN4Q9NQP4 134 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 FAF1Q9UNN5 650 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 PTPDC1A2A3K4 754 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 SH3BP5O60239 455 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 KRT2P35908 639 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 TBC1D31Q96DN5 1066 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 RLBP1P12271 317 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 GEN1Q17RS7 908 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 GOLGA5Q8TBA6 731 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 INTS4Q96HW7 963 aaKnown RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 SMIM24O75264 130 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 SNX16P57768 344 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 CCT6BQ92526 530 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 PTCD1O75127 700 aaKnown RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 STMN1P16949 149 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 TRPC3Q13507 836 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 RUFY3Q7L099 469 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 STAG1Q8WVM7 1258 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 MAK16Q9BXY0 300 aaKnown RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 MBIPQ9NS73 344 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 IMPACTQ9P2X3 320 aa10.98□□□□□ -0.65
COL4A6-201ENST00000334504 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-201ENST00000334504 ZNF445P59923 1031 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 CHST3Q7LGC8 479 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 ERICH3Q5RHP9 1530 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 PRG4Q92954 1404 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 HIP1RO75146 1068 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 RPSAP08865 295 aaKnown RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 LRRC43Q8N309 656 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 CLSTN2Q9H4D0 955 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 SPOPO43791 374 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 LUC7L3O95232 432 aaKnown RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 SESN3P58005 492 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 NOX5Q96PH1 765 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 MTMR3Q13615 1198 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 PSMB7Q99436 277 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 PLEKHA4Q9H4M7 779 aa10.97□□□□□ -0.65
COL4A6-201ENST00000334504 DBF4Q9UBU7 674 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-201ENST00000334504 ANKRD42Q8N9B4 389 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 LRRD1A4D1F6 860 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 CROCCP2Q86T23 111 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 TMTC2Q8N394 836 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 CAPS2Q9BXY5 557 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 968.5 ms