RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 GZF1Q9H116 711 aaPredicted RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 CHD4Q14839 1912 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 ELP1O95163 1332 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 BRWD3Q6RI45 1802 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 BCAMP50895 628 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 NAA16Q6N069 864 aaPredicted RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 TMEM87BQ96K49 555 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 NACAP1Q9BZK3 213 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 ZSCAN16Q9H4T2 348 aaPredicted RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 CNNM2Q9H8M5 875 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
SIMC1-201ENST00000332772 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 KIAA1551Q9HCM1 1747 aa10.66□□□□□ -0.7
SIMC1-201ENST00000332772 PHF14O94880 888 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
SIMC1-201ENST00000332772 TM4SF1P30408 202 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 NT5C2P49902 561 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 UBE2HP62256 183 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
SIMC1-201ENST00000332772 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 GPT2Q8TD30 523 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
SIMC1-201ENST00000332772 MAST2Q6P0Q8 1798 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 COL4A1P02462 1669 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 PCP11498 1178 aaKnown RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 PDIA3P30101 505 aaKnown RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 KCNQ4P56696 695 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 SCRN1Q12765 414 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 BICDL1Q6ZP65 573 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 C15orf52Q6ZUT6 534 aaKnown RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 C3orf67Q6ZVT6 689 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 USP48Q86UV5 1035 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 MAGEB6Q8N7X4 407 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 CELF1Q92879 486 aaKnown RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 FAM84BQ96KN1 310 aaPredicted RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 SCAND2PQ9GZW5 306 aaPredicted RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 GRPEL1Q9HAV7 217 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 LRP2BPQ9P2M1 347 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 DUOX1Q9NRD9 1551 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 TAF1P21675 1872 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 SALL1Q9NSC2 1324 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 PRC1O43663 620 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 KRT85P78386 507 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 CACNA1SQ13698 1873 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 ZSCAN23Q3MJ62 389 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 NSUN7Q8NE18 718 aaKnown RBP10.64□□□□□ -0.71
SIMC1-201ENST00000332772 KRT23Q9C075 422 aa10.64□□□□□ -0.71
SIMC1-201ENST00000332772 VPS37CA5D8V6 355 aaPredicted RBP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 RCAN1P53805 252 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 GRAPQ13588 217 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 NFIXQ14938 502 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 CAVIN1Q6NZI2 390 aaKnown RBP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 FAM184AQ8NB25 1140 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 GRAPLQ8TC17 118 aaPredicted RBP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 NAPBQ9H115 298 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
SIMC1-201ENST00000332772 LRRC4BQ9NT99 713 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
SIMC1-201ENST00000332772 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 MBD4O95243 580 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 APPP05067 770 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 LIFRP42702 1097 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 APOBRQ0VD83 1088 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 CRY2Q49AN0 593 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
SIMC1-201ENST00000332772 TMC4Q7Z404 712 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 SGMS1Q86VZ5 419 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 STAG1Q8WVM7 1258 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
SIMC1-201ENST00000332772 ANGEL1Q9UNK9 670 aaKnown RBP10.62□□□□□ -0.71
SIMC1-201ENST00000332772 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
SIMC1-201ENST00000332772 NID2Q14112 1375 aa10.62□□□□□ -0.71
SIMC1-201ENST00000332772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
SIMC1-201ENST00000332772 PLSCR1O15162 318 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 HIBADHP31937 336 aaKnown RBP10.61□□□□□ -0.71
SIMC1-201ENST00000332772 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
SIMC1-201ENST00000332772 STK3Q13188 491 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 FAM182BQ5T319 152 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
SIMC1-201ENST00000332772 LRSAM1Q6UWE0 723 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 TMTC2Q8N394 836 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 BRIP1Q9BX63 1249 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 CNPY2Q9Y2B0 182 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 IRS2Q9Y4H2 1338 aa10.61□□□□□ -0.71
SIMC1-201ENST00000332772 RGPD3A6NKT7 1758 aaPredicted RBP10.61□□□□□ -0.71
SIMC1-201ENST00000332772 RGPD4Q7Z3J3 1758 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms