RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 CCDC114Q96M63 670 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 DUOX2Q9NRD8 1548 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 A0A1B0GUL7 405 aa21.39■■□□□ 1.02
NPLOC4-201ENST00000331134 hCG_1642624A0A1W2PR95 340 aa21.39■■□□□ 1.02
NPLOC4-201ENST00000331134 KRT9P35527 623 aa21.39■■□□□ 1.02
NPLOC4-201ENST00000331134 KIAA0753Q2KHM9 967 aa21.39■■□□□ 1.02
NPLOC4-201ENST00000331134 SLF1Q9BQI6 1058 aa21.39■■□□□ 1.02
NPLOC4-201ENST00000331134 NDUFAB1O14561 156 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 DIS3L2Q8IYB7 885 aaKnown RBP21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 ETF1P62495 437 aaKnown RBP21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 SPECC1LQ69YQ0 1117 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 NAPGQ99747 312 aaPredicted RBP21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 PNOCQ13519 176 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 CFAP58Q5T655 872 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 EAF2Q96CJ1 260 aaPredicted RBP21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 MRVI1Q9Y6F6 885 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 MAP3K5Q99683 1374 aa21.39■■□□□ 1.01
NPLOC4-201ENST00000331134 PDE4BQ07343 736 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 PLCH2O75038 1416 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 DMTNQ08495 405 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 CPLX4Q7Z7G2 160 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 IQUBQ8NA54 791 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 AFAP1L1Q8TED9 768 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 PAIP2Q9BPZ3 127 aaKnown RBP21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 DDX21Q9NR30 783 aaKnown RBP eCLIP21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 KIAA1468Q9P260 1216 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 CTNND2Q9UQB3 1225 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 GOLGA8FQ08AF8 430 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 GOLGA8DPQ0D2H9 430 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 ATL3Q6DD88 541 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 MAGEB6Q8N7X4 407 aa21.38■■□□□ 1.01
NPLOC4-201ENST00000331134 FTOQ9C0B1 505 aaKnown RBP eCLIP21.38■■□□□ 1.013e-7■■■□□ 17.7
NPLOC4-201ENST00000331134 CCDC121Q6ZUS5 278 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 BMP15O95972 392 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 UQCRFS1P1P0C7P4 283 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 NLRP12P59046 1061 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 CNNM2Q9H8M5 875 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 TBC1D8BQ0IIM8 1120 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 CRACR2BQ8N4Y2 399 aaPredicted RBP21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 KCNJ14Q9UNX9 436 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 NAA30Q147X3 362 aaPredicted RBP21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 CABLES1Q8TDN4 633 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 PYM1Q9BRP8 204 aaKnown RBP21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 TAB2Q9NYJ8 693 aa21.37■■□□□ 1.01
NPLOC4-201ENST00000331134 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 TM6SF1Q9BZW5 370 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 IMPACTQ9P2X3 320 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 PRDM1O75626 825 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 EZRP15311 586 aaKnown RBP21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 SELENOSQ9BQE4 189 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 KRT40Q6A162 431 aa21.36■■□□□ 1.01
NPLOC4-201ENST00000331134 HGSO14964 777 aaPredicted RBP21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 LLPHQ9BRT6 129 aaKnown RBP21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 FAM170AA1A519 330 aa21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 SEC31AO94979 1220 aaKnown RBP21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 TTC21AQ8NDW8 1320 aa21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 KCNQ3O43525 872 aa21.35■■□□□ 1.01
NPLOC4-201ENST00000331134 CETN2P41208 172 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 KBTBD3Q8NAB2 608 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 SSH3Q8TE77 659 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 PLEKHF1Q96S99 279 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 MBD4O95243 580 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 HOXC9P31274 260 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 ANKRD18AQ8IVF6 992 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 LARGE1O95461 756 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 MEX3CQ5U5Q3 659 aaKnown RBP21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 MYSM1Q5VVJ2 828 aa21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
NPLOC4-201ENST00000331134 KDM6BO15054 1643 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 GOLGA6CA6NDK9 693 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 GOLGA6DP0CG33 693 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 KRT13P13646 458 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 ARID5BQ14865 1188 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 EEF2KMTQ96G04 330 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 ZSWIM6Q9HCJ5 1215 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 GOLGA6AQ9NYA3 693 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 GPAA1O43292 621 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 FANCLQ9NW38 375 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 AOX1Q06278 1338 aa21.33■■□□□ 1.01
NPLOC4-201ENST00000331134 NAA16Q6N069 864 aaPredicted RBP21.33■■□□□ 1
NPLOC4-201ENST00000331134 PFKFB1P16118 471 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 KRT2P35908 639 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 ABCC1P33527 1531 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 MSL1Q68DK7 614 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 UTP14CQ5TAP6 766 aaKnown RBP21.32■■□□□ 1
NPLOC4-201ENST00000331134 GBP6Q6ZN66 633 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 C11orf57Q6ZUT1 292 aaPredicted RBP21.32■■□□□ 1
NPLOC4-201ENST00000331134 NAPAP54920 295 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 CUL4AQ13619 759 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 RILPL1Q5EBL4 403 aa21.32■■□□□ 1
NPLOC4-201ENST00000331134 SND1Q7KZF4 910 aaKnown RBP eCLIP21.32■■□□□ 1
NPLOC4-201ENST00000331134 CCDC25Q86WR0 208 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms