RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 CTAGE6Q86UF2 777 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 CTAGE4Q8IX94 777 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 GSPT2Q8IYD1 628 aaKnown RBP23.56■■□□□ 1.36
CMTM4-201ENST00000330687 ACBD3Q9H3P7 528 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 COBLO75128 1261 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 NCAPH2Q6IBW4 605 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 CAPZA3Q96KX2 299 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 U3KPZ7 1027 aaPredicted RBP23.55■■□□□ 1.36
CMTM4-201ENST00000330687 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 CXorf56Q9H5V9 222 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 MKRN1Q9UHC7 482 aaKnown RBP23.55■■□□□ 1.36
CMTM4-201ENST00000330687 SAMM50Q9Y512 469 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 GOLGA6L9A6NEM1 432 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 MCTP2Q6DN12 878 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 MMS22LQ6ZRQ5 1243 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 PPFIBP1Q86W92 1011 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 AIFM3Q96NN9 605 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 EHD4Q9H223 541 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 CPS1P31327 1500 aa23.55■■□□□ 1.36
CMTM4-201ENST00000330687 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
CMTM4-201ENST00000330687 LRRIQ3A6PVS8 624 aaPredicted RBP23.54■■□□□ 1.36
CMTM4-201ENST00000330687 MAP2K7O14733 419 aa23.54■■□□□ 1.36
CMTM4-201ENST00000330687 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
CMTM4-201ENST00000330687 SLC35F6Q8N357 371 aa23.54■■□□□ 1.36
CMTM4-201ENST00000330687 NGDNQ8NEJ9 315 aaKnown RBP23.54■■□□□ 1.36
CMTM4-201ENST00000330687 LGR6Q9HBX8 967 aa23.54■■□□□ 1.36
CMTM4-201ENST00000330687 NPHP4O75161 1426 aaPredicted RBP23.54■■□□□ 1.36
CMTM4-201ENST00000330687 PES1O00541 588 aaKnown RBP23.53■■□□□ 1.36
CMTM4-201ENST00000330687 MYSM1Q5VVJ2 828 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 NOA1Q8NC60 698 aaKnown RBP23.53■■□□□ 1.36
CMTM4-201ENST00000330687 KIFC2Q96AC6 838 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 PCDHA5Q9Y5H7 936 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 GOLGA8BA8MQT2 603 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 GOLIM4O00461 696 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 KCNJ6P48051 423 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 SMARCC2Q8TAQ2 1214 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 RTEL1Q9NZ71 1219 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 CTAGE9A4FU28 777 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 PDE4BQ07343 736 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 SPECC1LQ69YQ0 1117 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 CEP112Q8N8E3 955 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 L1RE1Q9UN81 338 aa23.53■■□□□ 1.36
CMTM4-201ENST00000330687 TSGA10IPQ3SY00 556 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 HSP90AB3PQ58FF7 597 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 ANO1Q5XXA6 986 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 CDC23Q9UJX2 597 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 PDIA3P30101 505 aaKnown RBP23.52■■□□□ 1.36
CMTM4-201ENST00000330687 ACRBPQ8NEB7 543 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 MROH7-TTC4A0A0A0MT08 1334 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 ENC1O14682 589 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 ECM2O94769 699 aaPredicted RBP23.52■■□□□ 1.36
CMTM4-201ENST00000330687 GRAMD1CQ8IYS0 662 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 HSD3B7Q9H2F3 369 aa23.52■■□□□ 1.36
CMTM4-201ENST00000330687 SAMSN1Q9NSI8 373 aaKnown RBP23.52■■□□□ 1.36
CMTM4-201ENST00000330687 CARMIL3Q8ND23 1372 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
CMTM4-201ENST00000330687 CDC27P30260 824 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 TC2NQ8N9U0 490 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 CRACR2AQ9BSW2 395 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 INTS13Q9NVM9 706 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 MYL6BP14649 208 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 NLRP6P59044 892 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
CMTM4-201ENST00000330687 JPH2Q9BR39 696 aaPredicted RBP23.51■■□□□ 1.35
CMTM4-201ENST00000330687 HOOK1Q9UJC3 728 aaKnown RBP23.51■■□□□ 1.35
CMTM4-201ENST00000330687 KLF18A0A0U1RQI7 1052 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 PPFIA4O75335 1185 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 ABL1P00519 1130 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 MRPS25P82663 173 aaKnown RBP23.5■■□□□ 1.35
CMTM4-201ENST00000330687 MCMDC2Q4G0Z9 681 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 EFCAB13Q8IY85 973 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 FAM71BQ8TC56 605 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 STX10O60499 249 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 KIF28PB7ZC32 967 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 EBAG9O00559 213 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 ALDH1L1O75891 902 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 PIP4K2AP48426 406 aaPredicted RBP23.5■■□□□ 1.35
CMTM4-201ENST00000330687 DBNDD2Q9BQY9 259 aa23.5■■□□□ 1.35
CMTM4-201ENST00000330687 LLPHQ9BRT6 129 aaKnown RBP23.5■■□□□ 1.35
CMTM4-201ENST00000330687 RIC3Q7Z5B4 369 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 TMEM139Q8IV31 216 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 IKBKBO14920 756 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 ATP2B2Q01814 1243 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 IGSF22Q8N9C0 903 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 IQUBQ8NA54 791 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 A0A1W2PQ27 194 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 A0A1W2PQ64 194 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 A0A1W2PQD8 194 aa23.49■■□□□ 1.35
CMTM4-201ENST00000330687 FDPSP14324 419 aaKnown RBP23.49■■□□□ 1.35
CMTM4-201ENST00000330687 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
CMTM4-201ENST00000330687 TFCP2Q12800 502 aa23.48■■□□□ 1.35
CMTM4-201ENST00000330687 GUCA1BQ9UMX6 200 aa23.48■■□□□ 1.35
CMTM4-201ENST00000330687 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
CMTM4-201ENST00000330687 A0A087WUV0 522 aaPredicted RBP23.47■■□□□ 1.35
CMTM4-201ENST00000330687 TEX33O43247 280 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 RAD9BQ6WBX8 426 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 CAGE1Q8TC20 777 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms