RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SPATA5Q8NB90 893 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 MPHOSPH8Q99549 860 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 CBX8Q9HC52 389 aa17.05■□□□□ 0.32
TPM3-206ENST00000330188 SNAP23O00161 211 aa17.04■□□□□ 0.32
TPM3-206ENST00000330188 TRDNQ13061 729 aa17.04■□□□□ 0.32
TPM3-206ENST00000330188 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
TPM3-206ENST00000330188 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
TPM3-206ENST00000330188 CCAR1Q8IX12 1150 aaKnown RBP17.04■□□□□ 0.32
TPM3-206ENST00000330188 ZNF830Q96NB3 372 aaPredicted RBP17.04■□□□□ 0.32
TPM3-206ENST00000330188 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
TPM3-206ENST00000330188 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
TPM3-206ENST00000330188 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
TPM3-206ENST00000330188 NTSR2O95665 410 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 APPP05067 770 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 SASS6Q6UVJ0 657 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 CHD4Q14839 1912 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 TPM2P07951 284 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 ALX1Q15699 326 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
TPM3-206ENST00000330188 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
TPM3-206ENST00000330188 ANGEL1Q9UNK9 670 aaKnown RBP17.03■□□□□ 0.32
TPM3-206ENST00000330188 RTL9Q8NET4 1388 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
TPM3-206ENST00000330188 CPLX1O14810 134 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
TPM3-206ENST00000330188 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
TPM3-206ENST00000330188 ZMYM6O95789 1325 aa17.02■□□□□ 0.32
TPM3-206ENST00000330188 TERF1P54274 439 aa17.02■□□□□ 0.31
TPM3-206ENST00000330188 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.31
TPM3-206ENST00000330188 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.31
TPM3-206ENST00000330188 SPATA31A5Q5VU36 1347 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 SPATA31A7Q8IWB4 1347 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 CCDC73Q6ZRK6 1079 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
TPM3-206ENST00000330188 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
TPM3-206ENST00000330188 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
TPM3-206ENST00000330188 NEDD4P46934 1319 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
TPM3-206ENST00000330188 B4E1Z4 1266 aa17■□□□□ 0.31
TPM3-206ENST00000330188 PATL2C9JE40 543 aaKnown RBP17■□□□□ 0.31
TPM3-206ENST00000330188 MAP3K12Q12852 859 aa17■□□□□ 0.31
TPM3-206ENST00000330188 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TPM3-206ENST00000330188 DNAJC25Q9H1X3 360 aa17■□□□□ 0.31
TPM3-206ENST00000330188 COL4A1P02462 1669 aa17■□□□□ 0.31
TPM3-206ENST00000330188 CTAGE5O15320 804 aa17■□□□□ 0.31
TPM3-206ENST00000330188 MBD4O95243 580 aa17■□□□□ 0.31
TPM3-206ENST00000330188 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
TPM3-206ENST00000330188 ME1P48163 572 aa17■□□□□ 0.31
TPM3-206ENST00000330188 FAM160A1Q05DH4 1040 aa17■□□□□ 0.31
TPM3-206ENST00000330188 PCDHA7Q9UN72 937 aa17■□□□□ 0.31
TPM3-206ENST00000330188 ZNF165P49910 485 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 APOA5Q6Q788 366 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 BRAPQ7Z569 592 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 LINC00301Q8NCQ3 95 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 GJB4Q9NTQ9 266 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 A0A1B0GUL6 1792 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 KIF28PB7ZC32 967 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM3-206ENST00000330188 BCAMP50895 628 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 IGDCC4Q8TDY8 1250 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 SENP2Q9HC62 589 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 CLIC4Q9Y696 253 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
TPM3-206ENST00000330188 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 CAVIN2O95810 425 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
TPM3-206ENST00000330188 KIF23Q02241 960 aaPredicted RBP16.98■□□□□ 0.31
TPM3-206ENST00000330188 MYSM1Q5VVJ2 828 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 BARGINQ6ZT62 677 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 NAPBQ9H115 298 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 ARMT1Q9H993 441 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
TPM3-206ENST00000330188 A0A1W2PQ27 194 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 A0A1W2PQ64 194 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 A0A1W2PQD8 194 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
TPM3-206ENST00000330188 YEATS4O95619 227 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 TPM3P06753 285 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 CDC27P30260 824 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 CHRNDQ07001 517 aa16.97■□□□□ 0.31
TPM3-206ENST00000330188 ADALQ6DHV7 355 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms