RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 GOLGA8BA8MQT2 603 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 TAF7LQ5H9L4 462 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 PPP4R3BQ5MIZ7 849 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 NCOA7Q8NI08 942 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 KCNG4Q8TDN1 519 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 NGLY1Q96IV0 654 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 ORC3Q9UBD5 711 aaPredicted RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 PAXBP1Q9Y5B6 917 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 NDUFA8P51970 172 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 RBM6P78332 1123 aaKnown RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 ARID5BQ14865 1188 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 SMAP1Q8IYB5 467 aaPredicted RBP17.89■□□□□ 0.45
BRCC3-201ENST00000330045 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 POLR3EQ9NVU0 708 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 HPS5Q9UPZ3 1129 aa17.89■□□□□ 0.45
BRCC3-201ENST00000330045 ZNF213O14771 459 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 YEATS4O95619 227 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
BRCC3-201ENST00000330045 EP400Q96L91 3159 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 CPLX1O14810 134 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 KCNQ2O43526 872 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 PCCAP05165 728 aaPredicted RBP17.88■□□□□ 0.45
BRCC3-201ENST00000330045 IFIT5Q13325 482 aaKnown RBP17.88■□□□□ 0.45
BRCC3-201ENST00000330045 HSP90AB3PQ58FF7 597 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 BRAPQ7Z569 592 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 FBXW7Q969H0 707 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
BRCC3-201ENST00000330045 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
BRCC3-201ENST00000330045 SPTLC2O15270 562 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 ANTXR2P58335 489 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 KIAA1468Q9P260 1216 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 ABCC12Q96J65 1359 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 GPAA1O43292 621 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 CSF1RP07333 972 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 SKILP12757 684 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 MYH7P12883 1935 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 BCL9LQ86UU0 1499 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 PLA2G12BQ9BX93 195 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 ZBTB1Q9Y2K1 713 aa17.87■□□□□ 0.45
BRCC3-201ENST00000330045 LRP6O75581 1613 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
BRCC3-201ENST00000330045 PI16Q6UXB8 463 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 RAB11FIP4Q86YS3 637 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 CCDC69A6NI79 296 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 SYNE3Q6ZMZ3 975 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 ZBTB38Q8NAP3 1195 aaPredicted RBP17.86■□□□□ 0.45
BRCC3-201ENST00000330045 CCDC112Q8NEF3 446 aa17.86■□□□□ 0.45
BRCC3-201ENST00000330045 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
BRCC3-201ENST00000330045 SYCP1Q15431 976 aa17.85■□□□□ 0.45
BRCC3-201ENST00000330045 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
BRCC3-201ENST00000330045 CEP135Q66GS9 1140 aa17.85■□□□□ 0.45
BRCC3-201ENST00000330045 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
BRCC3-201ENST00000330045 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
BRCC3-201ENST00000330045 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
BRCC3-201ENST00000330045 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
BRCC3-201ENST00000330045 HLFQ16534 295 aa17.84■□□□□ 0.45
BRCC3-201ENST00000330045 ATP2B3Q16720 1220 aa17.84■□□□□ 0.45
BRCC3-201ENST00000330045 CCZ1BP86790 482 aa17.84■□□□□ 0.45
BRCC3-201ENST00000330045 CCZ1P86791 482 aaPredicted RBP17.84■□□□□ 0.45
BRCC3-201ENST00000330045 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
BRCC3-201ENST00000330045 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
BRCC3-201ENST00000330045 BPIFA3Q9BQP9 254 aa17.84■□□□□ 0.45
BRCC3-201ENST00000330045 USP27XA6NNY8 438 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 KIF28PB7ZC32 967 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 KIF23Q02241 960 aaPredicted RBP17.83■□□□□ 0.45
BRCC3-201ENST00000330045 TRDNQ13061 729 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 DPCR1Q3MIW9 517 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 ANO1Q5XXA6 986 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 SYNE4Q8N205 404 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.45
BRCC3-201ENST00000330045 ZNF202O95125 648 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.44
BRCC3-201ENST00000330045 MCAMP43121 646 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 KCNQ4P56696 695 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 GSDMDP57764 484 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 CBX1P83916 185 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 ZNF592Q92610 1267 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 PKNOX2Q96KN3 472 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 NEDD4P46934 1319 aa17.83■□□□□ 0.44
BRCC3-201ENST00000330045 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 LDHAL6AQ6ZMR3 332 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 STARD3NLO95772 234 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 ADD2P35612 726 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 NYAP1Q6ZVC0 841 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 IMPACTQ9P2X3 320 aa17.82■□□□□ 0.44
BRCC3-201ENST00000330045 C4AP0C0L4 1744 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms