RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-201ENST00000328300 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 MAP9Q49MG5 647 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-201ENST00000328300 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
COL4A5-201ENST00000328300 IDEP14735 1019 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 WDR78Q5VTH9 848 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.331e-5■■■■□ 25.7
COL4A5-201ENST00000328300 UQCRHP07919 91 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
COL4A5-201ENST00000328300 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-201ENST00000328300 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 SLC27A2O14975 620 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
COL4A5-201ENST00000328300 APBB1IPQ7Z5R6 666 aaPredicted RBP13□□□□□ -0.33
COL4A5-201ENST00000328300 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 NECAB1Q8N987 351 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 ANGEL1Q9UNK9 670 aaKnown RBP13□□□□□ -0.33
COL4A5-201ENST00000328300 COPRSQ9NQ92 184 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 SAMM50Q9Y512 469 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 F8W031 263 aaPredicted RBP13□□□□□ -0.33
COL4A5-201ENST00000328300 PLCD1P51178 756 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 VEZTQ9HBM0 779 aa13□□□□□ -0.33
COL4A5-201ENST00000328300 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
COL4A5-201ENST00000328300 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 USP25Q9UHP3 1055 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 KRT13P13646 458 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 GPAA1O43292 621 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
COL4A5-201ENST00000328300 UBXN4Q92575 508 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 NAA15Q9BXJ9 866 aaKnown RBP12.99□□□□□ -0.33
COL4A5-201ENST00000328300 DIP2CQ9Y2E4 1556 aa12.99□□□□□ -0.33
COL4A5-201ENST00000328300 CASQ1P31415 396 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 MPNDQ8N594 471 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 DDX12PQ92771 950 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 NEBLO76041 1014 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 PRPHP41219 470 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
COL4A5-201ENST00000328300 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 ZSCAN23Q3MJ62 389 aa12.98□□□□□ -0.33
COL4A5-201ENST00000328300 KIF4AO95239 1232 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
COL4A5-201ENST00000328300 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 APBA3O96018 575 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 TIMM10P62072 90 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 DTHD1Q6ZMT9 781 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 ELP1O95163 1332 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 HSPA4P34932 840 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 SIK1P57059 783 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
COL4A5-201ENST00000328300 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 TUBB4BP68371 445 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
COL4A5-201ENST00000328300 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
COL4A5-201ENST00000328300 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
COL4A5-201ENST00000328300 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 LEMD3Q9Y2U8 911 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-201ENST00000328300 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.33
COL4A5-201ENST00000328300 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms