RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TIGD1Q96MW7 591 aa22.15■■□□□ 1.14
RTN4-201ENST00000317610 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
RTN4-201ENST00000317610 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
RTN4-201ENST00000317610 KIF28PB7ZC32 967 aa22.15■■□□□ 1.14
RTN4-201ENST00000317610 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
RTN4-201ENST00000317610 PFKFB1P16118 471 aa22.14■■□□□ 1.14
RTN4-201ENST00000317610 ANTXR2P58335 489 aa22.14■■□□□ 1.14
RTN4-201ENST00000317610 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.14
RTN4-201ENST00000317610 SYNE3Q6ZMZ3 975 aa22.14■■□□□ 1.13
RTN4-201ENST00000317610 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.13
RTN4-201ENST00000317610 MYH7P12883 1935 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 NRDCO43847 1150 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 IGSF3O75054 1194 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 FGAP02671 866 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 H2AFXP16104 143 aaPredicted RBP22.13■■□□□ 1.13
RTN4-201ENST00000317610 HSD3B7Q9H2F3 369 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 TUBE1Q9UJT0 475 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 SLC39A14Q15043 492 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 NCOA7Q8NI08 942 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 PUS3Q9BZE2 481 aaKnown RBP22.13■■□□□ 1.13
RTN4-201ENST00000317610 MROH7-TTC4A0A0A0MT08 1334 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 CPDO75976 1380 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 ABCC12Q96J65 1359 aa22.13■■□□□ 1.13
RTN4-201ENST00000317610 HAND2P61296 217 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 FANCCQ00597 558 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 TERF2Q15554 542 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 ZNF771Q7L3S4 317 aaPredicted RBP22.12■■□□□ 1.13
RTN4-201ENST00000317610 CEP126Q9P2H0 1117 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 BIN1O00499 593 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 SYT10Q6XYQ8 523 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 APPBP2Q92624 585 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 FBXO3Q9UK99 471 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 HPSEQ9Y251 543 aa22.12■■□□□ 1.13
RTN4-201ENST00000317610 FAM237AA0A1B0GTK4 181 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 CPLX1O14810 134 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 WDHD1O75717 1129 aaPredicted RBP22.11■■□□□ 1.13
RTN4-201ENST00000317610 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
RTN4-201ENST00000317610 CCDC158Q5M9N0 1113 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
RTN4-201ENST00000317610 ZNF446Q9NWS9 450 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 CCP110O43303 1012 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 GJB4Q9NTQ9 266 aa22.11■■□□□ 1.13
RTN4-201ENST00000317610 WASHC4Q2M389 1173 aa22.1■■□□□ 1.13
RTN4-201ENST00000317610 TTC39AQ5SRH9 613 aa22.1■■□□□ 1.13
RTN4-201ENST00000317610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.1■■□□□ 1.138e-8■□□□□ 10.6
RTN4-201ENST00000317610 PHLPP2Q6ZVD8 1323 aa22.1■■□□□ 1.13
RTN4-201ENST00000317610 PPP6R2O75170 966 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 TMX1Q9H3N1 280 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 AKAP2Q9Y2D5 859 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 FAM193AP78312 1265 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 TAF3Q5VWG9 929 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 RALYLQ86SE5 291 aaKnown RBP22.09■■□□□ 1.13
RTN4-201ENST00000317610 XAGE2Q96GT9 111 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
RTN4-201ENST00000317610 LMOD1P29536 600 aaPredicted RBP22.08■■□□□ 1.13
RTN4-201ENST00000317610 ADORA1P30542 326 aa22.08■■□□□ 1.13
RTN4-201ENST00000317610 ETF1P62495 437 aaKnown RBP22.08■■□□□ 1.13
RTN4-201ENST00000317610 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
RTN4-201ENST00000317610 ZMYM6O95789 1325 aa22.08■■□□□ 1.12
RTN4-201ENST00000317610 MYO1BO43795 1136 aa22.08■■□□□ 1.12
RTN4-201ENST00000317610 SYKP43405 635 aa22.08■■□□□ 1.12
RTN4-201ENST00000317610 ERCC6LQ2NKX8 1250 aa22.08■■□□□ 1.12
RTN4-201ENST00000317610 PUS7LQ9H0K6 701 aaKnown RBP22.08■■□□□ 1.12
RTN4-201ENST00000317610 ECM29Q5VYK3 1845 aa22.08■■□□□ 1.12
RTN4-201ENST00000317610 ZNF213O14771 459 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 CBFA2T2O43439 604 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 ATP1A3P13637 1013 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 PTPAQ15257 358 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 MYL5Q02045 173 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 LRRN4CLQ8ND94 238 aa22.07■■□□□ 1.12
RTN4-201ENST00000317610 SCARF1Q14162 830 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 SHC4Q6S5L8 630 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 JMYQ8N9B5 988 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 GPAA1O43292 621 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 MARCKSP29966 332 aaPredicted RBP22.06■■□□□ 1.12
RTN4-201ENST00000317610 BMS1Q14692 1282 aaKnown RBP22.06■■□□□ 1.12
RTN4-201ENST00000317610 GORABQ5T7V8 394 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 FCHSD1Q86WN1 690 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 NBPF3Q9H094 633 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 ZBTB3Q9H5J0 574 aa22.06■■□□□ 1.12
RTN4-201ENST00000317610 A1BGP04217 495 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 ZAP70P43403 619 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 UBASH3AP57075 661 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 CCDC57Q2TAC2 916 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 TRIM65Q6PJ69 517 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 VPS37DQ86XT2 251 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 CREBRFQ8IUR6 639 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 MAP3K14Q99558 947 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 ALG1Q9BT22 464 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 ATRNO75882 1429 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 RESP18Q5W5W9 173 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 VSTM4Q8IW00 320 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 DPF2Q92785 391 aa22.05■■□□□ 1.12
RTN4-201ENST00000317610 ANGEL1Q9UNK9 670 aaKnown RBP22.05■■□□□ 1.12
RTN4-201ENST00000317610 AKAP11Q9UKA4 1901 aa22.04■■□□□ 1.12
RTN4-201ENST00000317610 CDKL5O76039 1030 aa22.04■■□□□ 1.12
RTN4-201ENST00000317610 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms