RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PUS7LQ9H0K6 701 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 GPHNQ9NQX3 736 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 SEC63Q9UGP8 760 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 RPS8P62241 208 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 SPECC1Q5M775 1068 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 TMEM87BQ96K49 555 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 IL25Q9H293 177 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 SAP30BPQ9UHR5 308 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 MROH5Q6ZUA9 1318 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 TRIM75PA6NK02 468 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF76P36508 570 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 SDR42E1Q8WUS8 393 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 ERCC4Q92889 916 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 SUSD4Q5VX71 490 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF804AQ7Z570 1209 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 CEP89Q96ST8 783 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 CD163L1Q9NR16 1453 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 LMOD1P29536 600 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 IL6STP40189 918 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 STIM1Q13586 685 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 CMTR1Q8N1G2 835 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 PTGS1P23219 599 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 OFD1O75665 1012 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 IFNL3Q8IZI9 196 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 CNBD1Q8NA66 436 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 TTLL11Q8NHH1 800 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 USP17L12C9JPN9 530 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 USP17L21D6R901 530 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 PDIA3P30101 505 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 DHX58Q96C10 678 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 USP28Q96RU2 1077 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 AATFQ9NY61 560 aaKnown RBP eCLIP7.12□□□□□ -1.277e-6■■■□□ 14.6
PRKDC-201ENST00000314191 USP21Q9UK80 565 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 KCNJ14Q9UNX9 436 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 KIF5BP33176 963 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 PIH1D3Q9NQM4 214 aaKnown RBP7.12□□□□□ -1.27
PRKDC-201ENST00000314191 C1orf167Q5SNV9 1468 aa7.12□□□□□ -1.27
PRKDC-201ENST00000314191 PTPN14Q15678 1187 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 TECPR2O15040 1411 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 UBA7P41226 1012 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 LLPHQ9BRT6 129 aaKnown RBP7.11□□□□□ -1.27
PRKDC-201ENST00000314191 TMOD2Q9NZR1 351 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 IDEP14735 1019 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 STX17P56962 302 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 hCG_1642624A0A1W2PR95 340 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 SLF2Q8IX21 1173 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 CIAO1O76071 339 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 TEX11Q8IYF3 940 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 URI1O94763 535 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF174Q15697 407 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 FAM47AQ5JRC9 791 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 PDIA6Q15084 440 aa7.11□□□□□ -1.27
PRKDC-201ENST00000314191 ARGLU1Q9NWB6 273 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-201ENST00000314191 DLC1Q96QB1 1528 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 M0R2C6 588 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 EIF5P55010 431 aaKnown RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 SCRN1Q12765 414 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 SMIM5Q71RC9 77 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 MCM7P33993 719 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 AKNAD1Q5T1N1 836 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 CCP110O43303 1012 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 UFL1O94874 794 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 ERFEQ4G0M1 354 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 GOLGA6L1Q8N7Z2 621 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 FTOQ9C0B1 505 aaKnown RBP eCLIP7.1□□□□□ -1.273e-6■■□□□ 13.1
PRKDC-201ENST00000314191 ATP10DQ9P241 1426 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF771Q7L3S4 317 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 C17orf53Q8N3J3 647 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 ZNHIT6Q9NWK9 470 aaKnown RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 DYNLL1P63167 89 aaKnown RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 FOXO4P98177 505 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 ANO1Q5XXA6 986 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 BMP2KQ9NSY1 1161 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
PRKDC-201ENST00000314191 MAPKAPK5Q8IW41 473 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 RRAGBQ5VZM2 374 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 TCP11L1Q9NUJ3 509 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 CAVIN2O95810 425 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 ATL3Q6DD88 541 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 CCDC70Q6NSX1 233 aa7.1□□□□□ -1.27
PRKDC-201ENST00000314191 PRKAB2O43741 272 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 HLA-DOAP06340 250 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CALM1P0DP23 149 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CALM2P0DP24 149 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CALM3P0DP25 149 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 SKILP12757 684 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 UBASH3AP57075 661 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 UBE3CQ15386 1083 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 ISCA1Q9BUE6 129 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 FBXO3Q9UK99 471 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 DEXIO95424 95 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 EPS15P42566 896 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 PLIN2Q99541 437 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 PPARAQ07869 468 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms