RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CNNM4Q6P4Q7 775 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 EFCAB8A8MWE9 144 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 HAUS2Q9NVX0 235 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
COL6A5-202ENST00000312481 CCDC88AQ3V6T2 1871 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 A0A1W2PQ27 194 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 A0A1W2PQ64 194 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 A0A1W2PQD8 194 aa9.97□□□□□ -0.81
COL6A5-202ENST00000312481 NYXQ9GZU5 481 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 VAMP4O75379 141 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 ERCC6LQ2NKX8 1250 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 ANO6Q4KMQ2 910 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 TMC6Q7Z403 805 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.81
COL6A5-202ENST00000312481 PDE4CQ08493 712 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 DSCC1Q9BVC3 393 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 STAP2Q9UGK3 403 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.81
COL6A5-202ENST00000312481 MYH13Q9UKX3 1938 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 FYB1O15117 783 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 CLSTN2Q9H4D0 955 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL6A5-202ENST00000312481 IKBKGQ9Y6K9 419 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 IFT172Q9UG01 1749 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 EVI5O60447 810 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.82
COL6A5-202ENST00000312481 USP48Q86UV5 1035 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 ACTN2P35609 894 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 FKBP4Q02790 459 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC152Q4G0S7 254 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 FAM114A2Q9NRY5 505 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 DAAM1Q9Y4D1 1078 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 CHMLP26374 656 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 MAP3K21Q5TCX8 1036 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
COL6A5-202ENST00000312481 BZW2Q9Y6E2 419 aaKnown RBP9.96□□□□□ -0.82
COL6A5-202ENST00000312481 N4BP3O15049 544 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 TRAPPC10P48553 1259 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 ZNF274Q96GC6 653 aaPredicted RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 ORC3Q9UBD5 711 aaPredicted RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 ABCC3O15438 1527 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 SSR1P43307 286 aaKnown RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 HCLS1P14317 486 aaPredicted RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 MAN1A1P33908 653 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 WTAPQ15007 396 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 PHLPP2Q6ZVD8 1323 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 AKR1B15C9JRZ8 316 aaPredicted RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 RTN1Q16799 776 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 WAPLQ7Z5K2 1190 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 IWS1Q96ST2 819 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 OVOS2A0A0G2JMS6 1433 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 FOXP2O15409 715 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 DKC1O60832 514 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 PPFIA4O75335 1185 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
COL6A5-202ENST00000312481 GOLGA5Q8TBA6 731 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 RABGGTAQ92696 567 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 STIM2Q9P246 746 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 CFAP57Q96MR6 1250 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 VCX3BQ9H321 246 aa9.95□□□□□ -0.82
COL6A5-202ENST00000312481 SLC8A1P32418 973 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 TMEM67Q5HYA8 995 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 TRIM7Q9C029 511 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 GOLGA8AA7E2F4 631 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 hCG_1984214I3L0E3 225 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 IFIT3O14879 490 aaKnown RBP9.94□□□□□ -0.82
COL6A5-202ENST00000312481 IDI1Q13907 227 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 GOLGA8QA0A0J9YX86 632 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 GOLGA8OA6NCC3 632 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 GOLGA8NF8WBI6 632 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 CHL1O00533 1208 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 SLC26A4O43511 780 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 MTIF2P46199 727 aaKnown RBP9.94□□□□□ -0.82
COL6A5-202ENST00000312481 PLCD3Q8N3E9 789 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 DEXIO95424 95 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 STAT6P42226 847 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 SGSM2O43147 1006 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 ESCO1Q5FWF5 840 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC121Q6ZUS5 278 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 EIF3CLB5ME19 914 aaKnown RBP9.94□□□□□ -0.82
COL6A5-202ENST00000312481 BRD1O95696 1058 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
COL6A5-202ENST00000312481 EIF3CQ99613 913 aaKnown RBP9.94□□□□□ -0.82
COL6A5-202ENST00000312481 STX10O60499 249 aa9.93□□□□□ -0.82
COL6A5-202ENST00000312481 GBP7Q8N8V2 638 aaPredicted RBP9.93□□□□□ -0.82
COL6A5-202ENST00000312481 TRIM58Q8NG06 486 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms