RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PDCP20941 246 aa25.12■■□□□ 1.61
ATG4D-201ENST00000309469 CYP7A1P22680 504 aa25.12■■□□□ 1.61
ATG4D-201ENST00000309469 DDR1Q08345 913 aa25.12■■□□□ 1.61
ATG4D-201ENST00000309469 RALYLQ86SE5 291 aaKnown RBP25.12■■□□□ 1.61
ATG4D-201ENST00000309469 PDS5AQ29RF7 1337 aaKnown RBP25.12■■□□□ 1.61
ATG4D-201ENST00000309469 SCRN1Q12765 414 aa25.12■■□□□ 1.61
ATG4D-201ENST00000309469 LCORLQ8N3X6 602 aa25.12■■□□□ 1.61
ATG4D-201ENST00000309469 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-201ENST00000309469 GSG1L2A8MUP6 293 aa25.11■■□□□ 1.61
ATG4D-201ENST00000309469 PRC1O43663 620 aa25.11■■□□□ 1.61
ATG4D-201ENST00000309469 ZNF274Q96GC6 653 aaPredicted RBP25.11■■□□□ 1.61
ATG4D-201ENST00000309469 LEMD3Q9Y2U8 911 aa25.11■■□□□ 1.61
ATG4D-201ENST00000309469 IRS2Q9Y4H2 1338 aa25.11■■□□□ 1.61
ATG4D-201ENST00000309469 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
ATG4D-201ENST00000309469 TRDNQ13061 729 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 ZNF827Q17R98 1081 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 FOXD4L6Q3SYB3 417 aaPredicted RBP25.1■■□□□ 1.61
ATG4D-201ENST00000309469 FOXD4L3Q6VB84 417 aaPredicted RBP25.1■■□□□ 1.61
ATG4D-201ENST00000309469 TBC1D10CQ8IV04 446 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 LLPHQ9BRT6 129 aaKnown RBP25.1■■□□□ 1.61
ATG4D-201ENST00000309469 NAPBQ9H115 298 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 ANKIB1Q9P2G1 1089 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 ATP6V1DQ9Y5K8 247 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 WDR19Q8NEZ3 1342 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 EVCP57679 992 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 MIGA1Q8NAN2 632 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 AKT1S1Q96B36 256 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 SLC4A4Q9Y6R1 1079 aa25.1■■□□□ 1.61
ATG4D-201ENST00000309469 ZBTB22O15209 634 aa25.09■■□□□ 1.61
ATG4D-201ENST00000309469 PRKAB2O43741 272 aa25.09■■□□□ 1.61
ATG4D-201ENST00000309469 PDIA3P30101 505 aaKnown RBP25.09■■□□□ 1.61
ATG4D-201ENST00000309469 ANTXR2P58335 489 aa25.09■■□□□ 1.61
ATG4D-201ENST00000309469 ADGRA1Q86SQ6 560 aa25.09■■□□□ 1.61
ATG4D-201ENST00000309469 TXNRD3Q86VQ6 643 aa25.09■■□□□ 1.61
ATG4D-201ENST00000309469 RBM17Q96I25 401 aaKnown RBP25.09■■□□□ 1.61
ATG4D-201ENST00000309469 VPS37CA5D8V6 355 aaPredicted RBP25.08■■□□□ 1.61
ATG4D-201ENST00000309469 JAK2O60674 1132 aa25.08■■□□□ 1.61
ATG4D-201ENST00000309469 NACAP1Q9BZK3 213 aa25.08■■□□□ 1.61
ATG4D-201ENST00000309469 XDHP47989 1333 aa25.08■■□□□ 1.61
ATG4D-201ENST00000309469 GPHNQ9NQX3 736 aaPredicted RBP25.08■■□□□ 1.6
ATG4D-201ENST00000309469 MAGEB6P1A0A0J9YX57 407 aa25.07■■□□□ 1.6
ATG4D-201ENST00000309469 SMARCC2Q8TAQ2 1214 aa25.07■■□□□ 1.6
ATG4D-201ENST00000309469 SLC51AQ86UW1 340 aa25.06■■□□□ 1.6
ATG4D-201ENST00000309469 COL23A1Q86Y22 540 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-201ENST00000309469 CHMP4CQ96CF2 233 aa25.06■■□□□ 1.6
ATG4D-201ENST00000309469 NAP1L2Q9ULW6 460 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-201ENST00000309469 NCLP19338 710 aaKnown RBP25.06■■□□□ 1.6
ATG4D-201ENST00000309469 CCT2P78371 535 aaKnown RBP25.06■■□□□ 1.6
ATG4D-201ENST00000309469 NAA16Q6N069 864 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-201ENST00000309469 NLGN1Q8N2Q7 840 aa25.06■■□□□ 1.6
ATG4D-201ENST00000309469 GPT2Q8TD30 523 aa25.06■■□□□ 1.6
ATG4D-201ENST00000309469 KLRG2A4D1S0 409 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-201ENST00000309469 HOXA10P31260 410 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-201ENST00000309469 TDO2P48775 406 aa25.05■■□□□ 1.6
ATG4D-201ENST00000309469 NSUN7Q8NE18 718 aaKnown RBP25.05■■□□□ 1.6
ATG4D-201ENST00000309469 BBOX1O75936 387 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 CHAF1AQ13111 956 aaPredicted RBP25.04■■□□□ 1.6
ATG4D-201ENST00000309469 L1TD1Q5T7N2 865 aaKnown RBP25.04■■□□□ 1.6
ATG4D-201ENST00000309469 ZNF384Q8TF68 577 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 RIOK1Q9BRS2 568 aaKnown RBP25.04■■□□□ 1.6
ATG4D-201ENST00000309469 CTDNEP1O95476 244 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 CDC37L1Q7L3B6 337 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 USP48Q86UV5 1035 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 BRPF3Q9ULD4 1205 aa25.04■■□□□ 1.6
ATG4D-201ENST00000309469 FSD2A1L4K1 749 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 GPSM2P81274 684 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 CTDSPL2Q05D32 466 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 C15orf52Q6ZUT6 534 aaKnown RBP25.03■■□□□ 1.6
ATG4D-201ENST00000309469 CYB5R4Q7L1T6 521 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 TMEM87AQ8NBN3 555 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 FLAD1Q8NFF5 587 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 NKX2-3Q8TAU0 364 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 NSUN4Q96CB9 384 aaKnown RBP25.03■■□□□ 1.6
ATG4D-201ENST00000309469 DDX11Q96FC9 970 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 CRAMP1Q96RY5 1269 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 GDPD2Q9HCC8 539 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 NCOA5Q9HCD5 579 aaKnown RBP25.03■■□□□ 1.6
ATG4D-201ENST00000309469 CNPY2Q9Y2B0 182 aa25.03■■□□□ 1.6
ATG4D-201ENST00000309469 GOLGA6L3A6NEY3 463 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 B4E1Z4 1266 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 HMGN5P82970 282 aaKnown RBP25.02■■□□□ 1.6
ATG4D-201ENST00000309469 MECOMQ03112 1051 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 NEDD4P46934 1319 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 KLF18A0A0U1RQI7 1052 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 MBD3O95983 291 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 AKNAD1Q5T1N1 836 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 FAM184AQ8NB25 1140 aa25.02■■□□□ 1.6
ATG4D-201ENST00000309469 PTPDC1A2A3K4 754 aa25.01■■□□□ 1.59
ATG4D-201ENST00000309469 CAVIN1Q6NZI2 390 aaKnown RBP25.01■■□□□ 1.59
ATG4D-201ENST00000309469 CNNM2Q9H8M5 875 aa25.01■■□□□ 1.59
ATG4D-201ENST00000309469 INCENPQ9NQS7 918 aa25.01■■□□□ 1.59
ATG4D-201ENST00000309469 NSFL1CQ9UNZ2 370 aaKnown RBP25.01■■□□□ 1.59
ATG4D-201ENST00000309469 ATP2B4P23634 1241 aa25■■□□□ 1.59
ATG4D-201ENST00000309469 DYNLL1P63167 89 aaKnown RBP25■■□□□ 1.59
ATG4D-201ENST00000309469 TMED8Q6PL24 325 aaPredicted RBP25■■□□□ 1.59
ATG4D-201ENST00000309469 TDRD7Q8NHU6 1098 aaKnown RBP25■■□□□ 1.59
ATG4D-201ENST00000309469 SDR42E1Q8WUS8 393 aa25■■□□□ 1.59
ATG4D-201ENST00000309469 ANGEL1Q9UNK9 670 aaKnown RBP25■■□□□ 1.59
ATG4D-201ENST00000309469 MFSD6Q6ZSS7 791 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms