RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 MIGA1Q8NAN2 632 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 LZTS2Q9BRK4 669 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 PRPF40AO75400 957 aaKnown RBP9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 MFSD14BQ5SR56 506 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 CEP57L1Q8IYX8 460 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 RFX7Q2KHR2 1363 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 MEGF6O75095 1541 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 MYOM1P52179 1685 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 PATL2C9JE40 543 aaKnown RBP9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 CTAGE5O15320 804 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 IGKV5-2P06315 115 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 CCDC192P0DO97 292 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 LRRC27Q9C0I9 530 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 COA1Q9GZY4 146 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 SLIT3O75094 1523 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 ZNF532Q9HCE3 1301 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 FILIP1LQ4L180 1135 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 TTLL6Q8N841 843 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 LLPHQ9BRT6 129 aaKnown RBP9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 ANKRD26Q9UPS8 1709 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 STX6O43752 255 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 KIF20AO95235 890 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 Q6ZUG5 572 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 MON2Q7Z3U7 1717 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 ATL3Q6DD88 541 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 CEP89Q96ST8 783 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 GJB2P29033 226 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 LRRC24Q50LG9 513 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
SNRPD1-201ENST00000300413 DALRD3Q5D0E6 543 aaKnown RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 RRP36Q96EU6 259 aaKnown RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 TNMDQ9H2S6 317 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 ATP8A2Q9NTI2 1148 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 DCAF15Q66K64 600 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 ADCY9O60503 1353 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 KCNQ2O43526 872 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 PDE6AP16499 860 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 GNA11P29992 359 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 GTF2IP78347 998 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 HLFQ16534 295 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 RABL6Q3YEC7 729 aaPredicted RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 TTLL5Q6EMB2 1281 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 KANK3Q6NY19 840 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 ZNF34Q8IZ26 560 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 ARMT1Q9H993 441 aa9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
SNRPD1-201ENST00000300413 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 SLC27A2O14975 620 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 EPS15P42566 896 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 MRE11P49959 708 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 CCT2P78371 535 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 PICK1Q9NRD5 415 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 PIM2Q9P1W9 311 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 MCM4P33991 863 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 CRAMP1Q96RY5 1269 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 NUP62CLQ9H1M0 184 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 ANGEL1Q9UNK9 670 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 PXDNQ92626 1479 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 KDM4AO75164 1064 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 SF3B3Q15393 1217 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 OTUD7AQ8TE49 926 aaPredicted RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 TCP11L1Q9NUJ3 509 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 MCTP2Q6DN12 878 aa9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
SNRPD1-201ENST00000300413 HSPA4P34932 840 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 DEKP35659 375 aaKnown RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 ALG1Q9BT22 464 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 DDX19AQ9NUU7 478 aaKnown RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 MED1Q15648 1581 aaPredicted RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 PARP1P09874 1014 aaKnown RBP9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 AMPD3Q01432 767 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 USP48Q86UV5 1035 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 ZBTB22O15209 634 aa9.58□□□□□ -0.88
SNRPD1-201ENST00000300413 GYG1P46976 350 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms