RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 H0YHG0 523 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 TPM1P09493 284 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 SLFNL1Q499Z3 407 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 EXOC5O00471 708 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
SPIDR-201ENST00000297423 MNAT1P51948 309 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
SPIDR-201ENST00000297423 FKBP15Q5T1M5 1219 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 KSR2Q6VAB6 950 aa17.09■□□□□ 0.33
SPIDR-201ENST00000297423 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
SPIDR-201ENST00000297423 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.33
SPIDR-201ENST00000297423 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.33
SPIDR-201ENST00000297423 RAI14Q9P0K7 980 aa17.08■□□□□ 0.33
SPIDR-201ENST00000297423 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.33
SPIDR-201ENST00000297423 TOB2Q14106 344 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-201ENST00000297423 LONRF3Q496Y0 759 aa17.08■□□□□ 0.32
SPIDR-201ENST00000297423 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-201ENST00000297423 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-201ENST00000297423 RESTQ13127 1097 aa17.08■□□□□ 0.32
SPIDR-201ENST00000297423 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.32
SPIDR-201ENST00000297423 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
SPIDR-201ENST00000297423 GOLGA1Q92805 767 aa17.08■□□□□ 0.32
SPIDR-201ENST00000297423 CDC25BP30305 580 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 SCRN1Q12765 414 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
SPIDR-201ENST00000297423 ERLIN1O75477 346 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-201ENST00000297423 H2AFXP16104 143 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-201ENST00000297423 SUGCTQ9HAC7 445 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 ERVV-2B6SEH9 535 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 LONRF2Q1L5Z9 754 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
SPIDR-201ENST00000297423 TMEM232C9JQI7 657 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 RXRAP19793 462 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 KRT32Q14532 448 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-201ENST00000297423 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 SASH3O75995 380 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
SPIDR-201ENST00000297423 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 DHX58Q96C10 678 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 WDR24Q96S15 920 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 BAG1Q99933 345 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-201ENST00000297423 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
SPIDR-201ENST00000297423 SPTLC2O15270 562 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 ZNF202O95125 648 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 CENPHQ9H3R5 247 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-201ENST00000297423 CAMTA1Q9Y6Y1 1673 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 SYKP43405 635 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 ZNF569Q5MCW4 686 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 DPF2Q92785 391 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 EFCAB8A8MWE9 144 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 PPP2R2CQ9Y2T4 447 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
SPIDR-201ENST00000297423 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
SPIDR-201ENST00000297423 FOXR1Q6PIV2 292 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 GOLIM4O00461 696 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 STX17P56962 302 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 SARM1Q6SZW1 724 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
SPIDR-201ENST00000297423 N4BP1O75113 896 aaKnown RBP17.04■□□□□ 0.32
SPIDR-201ENST00000297423 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 PNOCQ13519 176 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 FANCLQ9NW38 375 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 ACTN2P35609 894 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 GOLGA5Q8TBA6 731 aa17.04■□□□□ 0.32
SPIDR-201ENST00000297423 KIF5CO60282 957 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 MYD88Q99836 296 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-201ENST00000297423 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 AOX1Q06278 1338 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPIDR-201ENST00000297423 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-201ENST00000297423 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
SPIDR-201ENST00000297423 TADA3O75528 432 aa17.02■□□□□ 0.32
SPIDR-201ENST00000297423 TBC1D8O95759 1140 aa17.02■□□□□ 0.32
SPIDR-201ENST00000297423 BEND3Q5T5X7 828 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms