RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 TXNDC9O14530 226 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 SMARCA5O60264 1052 aaPredicted RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 NUCKS1Q9H1E3 243 aaKnown RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 IFNKQ9P0W0 207 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNRK-201ENST00000296088 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 RSPH3Q86UC2 560 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 HOMER3Q9NSC5 361 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 GOLGA8QA0A0J9YX86 632 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 GOLGA8OA6NCC3 632 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 GOLGA8NF8WBI6 632 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 BRF1Q92994 677 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 ELP1O95163 1332 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 GOLGA8KD6RF30 607 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 E7EVH7 732 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 DRC3Q9H069 523 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 U2AF2P26368 475 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNRK-201ENST00000296088 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 RAB17Q9H0T7 212 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
SNRK-201ENST00000296088 ZNF644Q9H582 1327 aaPredicted RBP13.93□□□□□ -0.18
SNRK-201ENST00000296088 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
SNRK-201ENST00000296088 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
SNRK-201ENST00000296088 STX10O60499 249 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 MCM7P33993 719 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 PRIM1P49642 420 aaKnown RBP13.92□□□□□ -0.18
SNRK-201ENST00000296088 RPAINQ86UA6 219 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 COG7P83436 770 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
SNRK-201ENST00000296088 MYD88Q99836 296 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 IGF1RP08069 1367 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 SPOPO43791 374 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 PFDN1O60925 122 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 GNA11P29992 359 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 TMEM110-MUSTN1A8MSY1 372 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 GNAT2P19087 354 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 PLCD1P51178 756 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 SLC8A3P57103 927 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
SNRK-201ENST00000296088 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 KRT3P12035 628 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 INPP1P49441 399 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 DBN1Q16643 649 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 CFAP221Q4G0U5 840 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 NAA16Q6N069 864 aaPredicted RBP13.91□□□□□ -0.18
SNRK-201ENST00000296088 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 SMIM24O75264 130 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 DDX54Q8TDD1 881 aaKnown RBP13.91□□□□□ -0.18
SNRK-201ENST00000296088 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
SNRK-201ENST00000296088 NSD2O96028 1365 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 GJC1P36383 396 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 NUCB1Q02818 461 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
SNRK-201ENST00000296088 MED4Q9NPJ6 270 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 ANKIB1Q9P2G1 1089 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 STAG1Q8WVM7 1258 aa13.91□□□□□ -0.18
SNRK-201ENST00000296088 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
SNRK-201ENST00000296088 TNFAIP3P21580 790 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 PSMD6Q15008 389 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 SLC9C1Q4G0N8 1177 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 WDR44Q5JSH3 913 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 DHX58Q96C10 678 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.9□□□□□ -0.18
SNRK-201ENST00000296088 ZPR1O75312 459 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 KRT2P35908 639 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 ARHGAP4P98171 946 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 AGTPBP1Q9UPW5 1226 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 PROSER2Q86WR7 435 aaPredicted RBP13.9□□□□□ -0.18
SNRK-201ENST00000296088 THEMISQ8N1K5 641 aaPredicted RBP13.9□□□□□ -0.18
SNRK-201ENST00000296088 VEZTQ9HBM0 779 aa13.9□□□□□ -0.18
SNRK-201ENST00000296088 ATP8B1O43520 1251 aa13.89□□□□□ -0.19
SNRK-201ENST00000296088 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
SNRK-201ENST00000296088 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
SNRK-201ENST00000296088 NCOA2Q15596 1464 aa13.89□□□□□ -0.19
SNRK-201ENST00000296088 UAP1Q16222 522 aaPredicted RBP13.89□□□□□ -0.19
SNRK-201ENST00000296088 GOLGA5Q8TBA6 731 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms