RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-201ENST00000281142 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 GRM8O00222 908 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 TSGA10IPQ3SY00 556 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 KSR2Q6VAB6 950 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 ZNF609O15014 1411 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 FANCGO15287 622 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 A1BGP04217 495 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 PROM2Q8N271 834 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 L2HGDHQ9H9P8 463 aa13.19□□□□□ -0.3
SCLT1-201ENST00000281142 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-201ENST00000281142 MYH15Q9Y2K3 1946 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 RREB1Q92766 1687 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 CTAGE5O15320 804 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 SEC31AO94979 1220 aaKnown RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 CERS3Q8IU89 383 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 PNMA6AP0CW24 399 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 NDUFA8P51970 172 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
SCLT1-201ENST00000281142 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-201ENST00000281142 PLSCR1O15162 318 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 MYL6BP14649 208 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■■■□ 20
SCLT1-201ENST00000281142 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-201ENST00000281142 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
SCLT1-201ENST00000281142 PFKFB2O60825 505 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 STARD3NLO95772 234 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 NEDD4P46934 1319 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 KRT32Q14532 448 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 CYP2C19P33261 490 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 GSDMDP57764 484 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
SCLT1-201ENST00000281142 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
SCLT1-201ENST00000281142 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 SFPQP23246 707 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 TFCP2Q12800 502 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 LINS1Q8NG48 757 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
SCLT1-201ENST00000281142 DPF2Q92785 391 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 KCND1Q9NSA2 647 aa13.15□□□□□ -0.3
SCLT1-201ENST00000281142 IRX3P78415 501 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 NCAPHQ15003 741 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms