RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 KLHL34Q8N239 644 aa14□□□□□ -0.17
SSRP1-201ENST00000278412 AIDAQ96BJ3 306 aa14□□□□□ -0.17
SSRP1-201ENST00000278412 CD209Q9NNX6 404 aa14□□□□□ -0.17
SSRP1-201ENST00000278412 HSP90AA1P07900 732 aaKnown RBP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 H0YIN7 160 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 ZFYP08048 801 aaPredicted RBP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
SSRP1-201ENST00000278412 FBXW7Q969H0 707 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 DBNDD1Q9H9R9 158 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 LEMD3Q9Y2U8 911 aa13.99□□□□□ -0.17
SSRP1-201ENST00000278412 C21orf2O43822 256 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 SP8Q8IXZ3 490 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 AATFQ9NY61 560 aaKnown RBP eCLIP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 LRRC37AA6NMS7 1700 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 F8W031 263 aaPredicted RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 DPEP1P16444 411 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 DDIT3P35638 169 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 RAB11FIP4Q86YS3 637 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 TPCN1Q9ULQ1 816 aa13.98□□□□□ -0.17
SSRP1-201ENST00000278412 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
SSRP1-201ENST00000278412 GSG1L2A8MUP6 293 aa13.97□□□□□ -0.17
SSRP1-201ENST00000278412 E7EWF7 191 aa13.97□□□□□ -0.17
SSRP1-201ENST00000278412 KCNA3P22001 575 aa13.97□□□□□ -0.17
SSRP1-201ENST00000278412 STK3Q13188 491 aa13.97□□□□□ -0.17
SSRP1-201ENST00000278412 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
SSRP1-201ENST00000278412 MPNDQ8N594 471 aa13.97□□□□□ -0.17
SSRP1-201ENST00000278412 TOB2Q14106 344 aaPredicted RBP13.97□□□□□ -0.17
SSRP1-201ENST00000278412 GTF2IP78347 998 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
SSRP1-201ENST00000278412 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.17
SSRP1-201ENST00000278412 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 PCDHAC2Q9Y5I4 1007 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 ME3Q16798 604 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.17
SSRP1-201ENST00000278412 SCN9AQ15858 1988 aa13.96□□□□□ -0.18
SSRP1-201ENST00000278412 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.18
SSRP1-201ENST00000278412 ZNF804AQ7Z570 1209 aa13.96□□□□□ -0.18
SSRP1-201ENST00000278412 CERS5Q8N5B7 392 aa13.96□□□□□ -0.18
SSRP1-201ENST00000278412 SENP2Q9HC62 589 aa13.96□□□□□ -0.18
SSRP1-201ENST00000278412 QSER1Q2KHR3 1735 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 RPS6KB1P23443 525 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 NEK1Q96PY6 1258 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 ZSCAN25Q6NSZ9 544 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 NEDD4P46934 1319 aa13.95□□□□□ -0.18
SSRP1-201ENST00000278412 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 EPB41L2O43491 1005 aaKnown RBP13.94□□□□□ -0.18
SSRP1-201ENST00000278412 CYP2D6P10635 497 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 AOC3Q16853 763 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 Q6ZUG5 572 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 EIF5BO60841 1220 aaKnown RBP13.94□□□□□ -0.18
SSRP1-201ENST00000278412 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
SSRP1-201ENST00000278412 ANTXR2P58335 489 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 BRF1Q92994 677 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 IL1R1P14778 569 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 SCNN1DP51172 638 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
SSRP1-201ENST00000278412 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
SSRP1-201ENST00000278412 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-201ENST00000278412 MINDY4BA8MYZ0 360 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 B4E1Z4 1266 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 SLURP2P0DP57 97 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 LRRFIP1Q32MZ4 808 aaKnown RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 ZC3H12CQ9C0D7 883 aaKnown RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 COL4A5P29400 1685 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 PRDM1O75626 825 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 LDHBP07195 334 aaKnown RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 FOXD4L6Q3SYB3 417 aaPredicted RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 STYK1Q6J9G0 422 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 FOXD4L3Q6VB84 417 aaPredicted RBP13.92□□□□□ -0.18
SSRP1-201ENST00000278412 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms