RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 XRCC6P12956 609 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRIM55-201ENST00000276573 GYS1P13807 737 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 GNAT2P19087 354 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 CYP7A1P22680 504 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 MRE11P49959 708 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 ANTXR2P58335 489 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
TRIM55-201ENST00000276573 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
TRIM55-201ENST00000276573 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
TRIM55-201ENST00000276573 SEMA3EO15041 775 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 GADD45BO75293 160 aaPredicted RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 ZNF445P59923 1031 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 TRDNQ13061 729 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 PROM2Q8N271 834 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 NSUN7Q8NE18 718 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 EPB41L4AQ9HCS5 686 aaPredicted RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 PRKAB2O43741 272 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 KLRK1P26718 216 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 HMGN5P82970 282 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 DNM1Q05193 864 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 GRAPQ13588 217 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 ZSCAN23Q3MJ62 389 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 NAPBQ9H115 298 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 NAP1L2Q9ULW6 460 aaPredicted RBP11.3□□□□□ -0.6
TRIM55-201ENST00000276573 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
TRIM55-201ENST00000276573 ZBTB22O15209 634 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 SERPINB2P05120 415 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
TRIM55-201ENST00000276573 CYB5R4Q7L1T6 521 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 DDX11Q96FC9 970 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 GRPEL1Q9HAV7 217 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 NCOA5Q9HCD5 579 aaKnown RBP11.29□□□□□ -0.6
TRIM55-201ENST00000276573 TFCP2L1Q9NZI6 479 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 PDS5AQ29RF7 1337 aaKnown RBP11.29□□□□□ -0.6
TRIM55-201ENST00000276573 UBR3Q6ZT12 1888 aa11.29□□□□□ -0.6
TRIM55-201ENST00000276573 CSPP1Q1MSJ5 1256 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 FERMT3Q86UX7 667 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 MIGA1Q8NAN2 632 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 FAM184AQ8NB25 1140 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 COL1A1P02452 1464 aaPredicted RBP11.28□□□□□ -0.6
TRIM55-201ENST00000276573 IRS2Q9Y4H2 1338 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 TCHHQ07283 1943 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 KLF18A0A0U1RQI7 1052 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 PTPDC1A2A3K4 754 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 B4E1Z4 1266 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
TRIM55-201ENST00000276573 ADGRA1Q86SQ6 560 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 KIF3AQ9Y496 699 aa11.28□□□□□ -0.6
TRIM55-201ENST00000276573 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.6
TRIM55-201ENST00000276573 H3BQV1 296 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 UBE2HP62256 183 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 PLSCR1O15162 318 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 FIBPO43427 364 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 TDO2P48775 406 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 KRT85P78386 507 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 ST5P78524 1137 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 RESTQ13127 1097 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 FAM173BQ6P4H8 233 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 ZNF384Q8TF68 577 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
TRIM55-201ENST00000276573 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
TRIM55-201ENST00000276573 NEDD4P46934 1319 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms