RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 GOLGA6L9A6NEM1 432 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 DTNBO60941 627 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 CTSWP56202 376 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 SYT10Q6XYQ8 523 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 TICAM2Q86XR7 235 aa13.28□□□□□ -0.28
CLSTN3-201ENST00000266546 AFF2P51816 1311 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 SGSM2O43147 1006 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 TUBB4AP04350 444 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 HSPA4P34932 840 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 SART3Q15020 963 aaKnown RBP13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 GTF3C6Q969F1 213 aa13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.28
CLSTN3-201ENST00000266546 ST5P78524 1137 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 CLEC17AQ6ZS10 378 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 CREB3L3Q68CJ9 461 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 NLRP10Q86W26 655 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 TRIM22Q8IYM9 498 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.29
CLSTN3-201ENST00000266546 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 MRPS27Q92552 414 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 SRRTQ9BXP5 876 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 BRMS1Q9HCU9 246 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 PAG1Q9NWQ8 432 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 FAM193AP78312 1265 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 ELF2Q15723 593 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 PYCARDQ9ULZ3 195 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 UBASH3AP57075 661 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 PDE4CQ08493 712 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 MCMDC2Q4G0Z9 681 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 LRRC2Q9BYS8 371 aa13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 PARP4Q9UKK3 1724 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-201ENST00000266546 KIAA0754O94854 1291 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 USP8P40818 1118 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 LRMPQ12912 555 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
CLSTN3-201ENST00000266546 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 DBNDD2Q9BQY9 259 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 STRCQ7RTU9 1775 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 CUL4AQ13619 759 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 PUM3Q15397 648 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 MARCH6O60337 910 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 Q6ZUG5 572 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 AIDAQ96BJ3 306 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 KIF2CQ99661 725 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 IFNKQ9P0W0 207 aa13.24□□□□□ -0.29
CLSTN3-201ENST00000266546 CDR1P51861 262 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 BCL9O00512 1426 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 MCM6Q14566 821 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 KLHL10Q6JEL2 608 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 LPIN2Q92539 896 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 MAGEC2Q9UBF1 373 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
CLSTN3-201ENST00000266546 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 HSPA1LP34931 641 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 KRT27Q7Z3Y8 459 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 CCDC148Q8NFR7 591 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 TIMM10P62072 90 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 MAP9Q49MG5 647 aa13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-201ENST00000266546 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms