RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
SH2D4A-201ENST00000265807 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 F13A1P00488 732 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 PDIA3P30101 505 aaKnown RBP13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 USP48Q86UV5 1035 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 SERPINB2P05120 415 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
SH2D4A-201ENST00000265807 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 APPP05067 770 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 KLHL40Q2TBA0 621 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 PRDX5P30044 214 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 FOSBP53539 338 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 CAVIN1Q6NZI2 390 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 NSUN7Q8NE18 718 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 PFKFB2O60825 505 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
SH2D4A-201ENST00000265807 B4E1Z4 1266 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 ZNF213O14771 459 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 PRC1O43663 620 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 MAP3K12Q12852 859 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 TNS1Q9HBL0 1735 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 RXRAP19793 462 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
SH2D4A-201ENST00000265807 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 NPHP1O15259 732 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 CYP7A1P22680 504 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 GPSM2P81274 684 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 ZSCAN25Q6NSZ9 544 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 SMARCC2Q8TAQ2 1214 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 APBA3O96018 575 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 ADRA2BP18089 450 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 GRAPQ13588 217 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 POTEAQ6S8J7 498 aa13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
SH2D4A-201ENST00000265807 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 SLC4A4Q9Y6R1 1079 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 COL11A2P13942 1736 aaPredicted RBP13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 EVCP57679 992 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 NSUN4Q96CB9 384 aaKnown RBP13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 MECOMQ03112 1051 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 ZSCAN23Q3MJ62 389 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 CTNNA3Q9UI47 895 aa13.34□□□□□ -0.27
SH2D4A-201ENST00000265807 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 ZKSCAN3Q9BRR0 538 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 FIBPO43427 364 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 FGD1P98174 961 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
SH2D4A-201ENST00000265807 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
SH2D4A-201ENST00000265807 NRXN2Q9P2S2 1712 aa13.32□□□□□ -0.28
SH2D4A-201ENST00000265807 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
SH2D4A-201ENST00000265807 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
SH2D4A-201ENST00000265807 NCOA7Q8NI08 942 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms