RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 PTPDC1A2A3K4 754 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 CSPP1Q1MSJ5 1256 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
CHKA-201ENST00000265689 ANKRD18AQ8IVF6 992 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 NCOA7Q8NI08 942 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 STRBPQ96SI9 672 aaKnown RBP19.89■□□□□ 0.77
CHKA-201ENST00000265689 DENND2AQ9ULE3 1009 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 UBR3Q6ZT12 1888 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 FOSBP53539 338 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 ANTXR2P58335 489 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 KRT85P78386 507 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 MAP3K12Q12852 859 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 AIDAQ96BJ3 306 aa19.89■□□□□ 0.77
CHKA-201ENST00000265689 IQSEC3Q9UPP2 1182 aaPredicted RBP19.89■□□□□ 0.77
CHKA-201ENST00000265689 MCM5P33992 734 aa19.88■□□□□ 0.77
CHKA-201ENST00000265689 TTC6Q86TZ1 520 aa19.88■□□□□ 0.77
CHKA-201ENST00000265689 FBXL16Q8N461 479 aa19.88■□□□□ 0.77
CHKA-201ENST00000265689 SETDB2Q96T68 719 aa19.88■□□□□ 0.77
CHKA-201ENST00000265689 TFIP11Q9UBB9 837 aaKnown RBP19.88■□□□□ 0.77
CHKA-201ENST00000265689 H3BQV1 296 aa19.87■□□□□ 0.77
CHKA-201ENST00000265689 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
CHKA-201ENST00000265689 RALYLQ86SE5 291 aaKnown RBP19.87■□□□□ 0.77
CHKA-201ENST00000265689 NBPF5PQ86XG9 351 aaPredicted RBP19.87■□□□□ 0.77
CHKA-201ENST00000265689 TBC1D10CQ8IV04 446 aa19.87■□□□□ 0.77
CHKA-201ENST00000265689 NKX2-3Q8TAU0 364 aa19.87■□□□□ 0.77
CHKA-201ENST00000265689 FAM43AQ8N2R8 423 aa19.87■□□□□ 0.77
CHKA-201ENST00000265689 MBD4O95243 580 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 NFIXQ14938 502 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 EVCP57679 992 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 RESTQ13127 1097 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 CCDC183Q5T5S1 534 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 CELF1Q92879 486 aaKnown RBP19.86■□□□□ 0.77
CHKA-201ENST00000265689 ARMT1Q9H993 441 aa19.86■□□□□ 0.77
CHKA-201ENST00000265689 NPHP1O15259 732 aa19.85■□□□□ 0.77
CHKA-201ENST00000265689 GYG1P46976 350 aa19.85■□□□□ 0.77
CHKA-201ENST00000265689 SLC10A5Q5PT55 438 aa19.85■□□□□ 0.77
CHKA-201ENST00000265689 BSDC1Q9NW68 430 aaPredicted RBP19.85■□□□□ 0.77
CHKA-201ENST00000265689 HMGN5P82970 282 aaKnown RBP19.85■□□□□ 0.77
CHKA-201ENST00000265689 TSPY26PQ9H489 355 aa19.85■□□□□ 0.77
CHKA-201ENST00000265689 SALL1Q9NSC2 1324 aa19.85■□□□□ 0.77
CHKA-201ENST00000265689 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
CHKA-201ENST00000265689 RAB11FIP4Q86YS3 637 aa19.84■□□□□ 0.77
CHKA-201ENST00000265689 RNF214Q8ND24 703 aa19.84■□□□□ 0.77
CHKA-201ENST00000265689 EPB41L4AQ9HCS5 686 aaPredicted RBP19.84■□□□□ 0.77
CHKA-201ENST00000265689 MINPP1Q9UNW1 487 aa19.84■□□□□ 0.77
CHKA-201ENST00000265689 RGL2O15211 777 aa19.84■□□□□ 0.77
CHKA-201ENST00000265689 PATL2C9JE40 543 aaKnown RBP19.83■□□□□ 0.77
CHKA-201ENST00000265689 TRDNQ13061 729 aa19.83■□□□□ 0.77
CHKA-201ENST00000265689 CYB5R4Q7L1T6 521 aa19.83■□□□□ 0.77
CHKA-201ENST00000265689 LRP2BPQ9P2M1 347 aa19.83■□□□□ 0.77
CHKA-201ENST00000265689 DOCK2Q92608 1830 aa19.83■□□□□ 0.77
CHKA-201ENST00000265689 PRKAB2O43741 272 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 GYS1P13807 737 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 CCDC173Q0VFZ6 552 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 IFNL3Q8IZI9 196 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 ANP32BQ92688 251 aaKnown RBP19.83■□□□□ 0.76
CHKA-201ENST00000265689 NYXQ9GZU5 481 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
CHKA-201ENST00000265689 INCENPQ9NQS7 918 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 HPS5Q9UPZ3 1129 aa19.83■□□□□ 0.76
CHKA-201ENST00000265689 GOLGA8BA8MQT2 603 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 ALX1Q15699 326 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 SPATA32Q96LK8 384 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 PPP1R9BQ96SB3 815 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 RRAGDQ9NQL2 400 aaPredicted RBP19.82■□□□□ 0.76
CHKA-201ENST00000265689 TFCP2L1Q9NZI6 479 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 ZNF804BA4D1E1 1349 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 ELP1O95163 1332 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 FDPSP14324 419 aaKnown RBP19.82■□□□□ 0.76
CHKA-201ENST00000265689 UBE4AQ14139 1066 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
CHKA-201ENST00000265689 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
CHKA-201ENST00000265689 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
CHKA-201ENST00000265689 NEDD4P46934 1319 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 GSG1L2A8MUP6 293 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 B4E1Z4 1266 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 GUCY1B3Q02153 619 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 EN1Q05925 392 aaPredicted RBP19.81■□□□□ 0.76
CHKA-201ENST00000265689 NAA16Q6N069 864 aaPredicted RBP19.81■□□□□ 0.76
CHKA-201ENST00000265689 MIGA1Q8NAN2 632 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 NLRP3Q96P20 1036 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 WDR19Q8NEZ3 1342 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 CTDSPL2Q05D32 466 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 NAPBQ9H115 298 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 ZSCAN16Q9H4T2 348 aaPredicted RBP19.81■□□□□ 0.76
CHKA-201ENST00000265689 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
CHKA-201ENST00000265689 ABCF2Q9UG63 623 aa19.8■□□□□ 0.76
CHKA-201ENST00000265689 CARMIL3Q8ND23 1372 aa19.8■□□□□ 0.76
CHKA-201ENST00000265689 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
CHKA-201ENST00000265689 TACC3Q9Y6A5 838 aa19.8■□□□□ 0.76
CHKA-201ENST00000265689 TPTE2Q6XPS3 522 aa19.79■□□□□ 0.76
CHKA-201ENST00000265689 PDGFDQ9GZP0 370 aaPredicted RBP19.79■□□□□ 0.76
CHKA-201ENST00000265689 GNL3LQ9NVN8 582 aaKnown RBP19.79■□□□□ 0.76
CHKA-201ENST00000265689 SLC4A4Q9Y6R1 1079 aa19.79■□□□□ 0.76
CHKA-201ENST00000265689 COL1A1P02452 1464 aaPredicted RBP19.79■□□□□ 0.76
CHKA-201ENST00000265689 LIG1P18858 919 aa19.79■□□□□ 0.76
CHKA-201ENST00000265689 CYP7A1P22680 504 aa19.79■□□□□ 0.76
CHKA-201ENST00000265689 KLRK1P26718 216 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms