RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-201ENST00000263559 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
VPS26A-201ENST00000263559 PNPLA7Q6ZV29 1317 aa18.71■□□□□ 0.59
VPS26A-201ENST00000263559 PRKAB2O43741 272 aa18.71■□□□□ 0.59
VPS26A-201ENST00000263559 HOXA10P31260 410 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-201ENST00000263559 ANKRD31Q8N7Z5 1873 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
VPS26A-201ENST00000263559 GSG1L2A8MUP6 293 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 STX6O43752 255 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 PTMSP20962 102 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 GPSM2P81274 684 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 MB21D2Q8IYB1 491 aaPredicted RBP18.7■□□□□ 0.58
VPS26A-201ENST00000263559 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 GTF3C6Q969F1 213 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
VPS26A-201ENST00000263559 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 GNAT2P19087 354 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
VPS26A-201ENST00000263559 TBC1D10CQ8IV04 446 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 NAPBQ9H115 298 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 RGPD3A6NKT7 1758 aaPredicted RBP18.69■□□□□ 0.58
VPS26A-201ENST00000263559 RGPD4Q7Z3J3 1758 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 BBOX1O75936 387 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 NSFL1CQ9UNZ2 370 aaKnown RBP18.69■□□□□ 0.58
VPS26A-201ENST00000263559 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
VPS26A-201ENST00000263559 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
VPS26A-201ENST00000263559 MCM5P33992 734 aa18.68■□□□□ 0.58
VPS26A-201ENST00000263559 RALYLQ86SE5 291 aaKnown RBP18.68■□□□□ 0.58
VPS26A-201ENST00000263559 FBXL16Q8N461 479 aa18.68■□□□□ 0.58
VPS26A-201ENST00000263559 GPR101Q96P66 508 aaPredicted RBP18.68■□□□□ 0.58
VPS26A-201ENST00000263559 SCRN1Q12765 414 aa18.68■□□□□ 0.58
VPS26A-201ENST00000263559 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
VPS26A-201ENST00000263559 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
VPS26A-201ENST00000263559 MAGEB6P1A0A0J9YX57 407 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 PRC1O43663 620 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 PFKFB2O60825 505 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 ANTXR2P58335 489 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 LMBRD1Q9NUN5 540 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 CHD4Q14839 1912 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 SKOR2Q2VWA4 1001 aaPredicted RBP18.67■□□□□ 0.58
VPS26A-201ENST00000263559 NKX2-3Q8TAU0 364 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
VPS26A-201ENST00000263559 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
VPS26A-201ENST00000263559 ZBTB22O15209 634 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 MMP10P09238 476 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 TRDNQ13061 729 aa18.67■□□□□ 0.58
VPS26A-201ENST00000263559 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
VPS26A-201ENST00000263559 TCHHQ07283 1943 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 MECOMQ03112 1051 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 EZH2Q15910 746 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 C15orf52Q6ZUT6 534 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 NACAP1Q9BZK3 213 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 MTMR6Q9Y217 621 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 CCDC88AQ3V6T2 1871 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 PRPF40AO75400 957 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 UFL1O94874 794 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 PRDX5P30044 214 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 TDO2P48775 406 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 DYNLL1P63167 89 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 CTDSPL2Q05D32 466 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 LARP1BQ659C4 914 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 TDRD7Q8NHU6 1098 aaKnown RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 ZNF274Q96GC6 653 aaPredicted RBP18.66■□□□□ 0.58
VPS26A-201ENST00000263559 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
VPS26A-201ENST00000263559 JAK2O60674 1132 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 ATP2B4P23634 1241 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 PDIA3P30101 505 aaKnown RBP18.65■□□□□ 0.58
VPS26A-201ENST00000263559 EN1Q05925 392 aaPredicted RBP18.65■□□□□ 0.58
VPS26A-201ENST00000263559 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 GGA1Q9UJY5 639 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 F13A1P00488 732 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 EVCP57679 992 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
VPS26A-201ENST00000263559 ZNF804AQ7Z570 1209 aa18.65■□□□□ 0.58
VPS26A-201ENST00000263559 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
VPS26A-201ENST00000263559 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.58
VPS26A-201ENST00000263559 CYB5R4Q7L1T6 521 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 PODXL2Q9NZ53 605 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 NEDD4P46934 1319 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 B4E1Z4 1266 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 SRGNP10124 158 aa18.64■□□□□ 0.57
VPS26A-201ENST00000263559 ANO8Q9HCE9 1232 aaPredicted RBP18.64■□□□□ 0.57
VPS26A-201ENST00000263559 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
VPS26A-201ENST00000263559 POLLQ9UGP5 575 aa18.63■□□□□ 0.57
VPS26A-201ENST00000263559 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
VPS26A-201ENST00000263559 PPEF1O14829 653 aaPredicted RBP18.63■□□□□ 0.57
VPS26A-201ENST00000263559 PDCP20941 246 aa18.63■□□□□ 0.57
VPS26A-201ENST00000263559 NCOA5Q9HCD5 579 aaKnown RBP18.63■□□□□ 0.57
VPS26A-201ENST00000263559 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 913 ms