RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 KCNA3P22001 575 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 MCM2P49736 904 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 MECOMQ03112 1051 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 KRT32Q14532 448 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 CC2D2BQ6DHV5 1058 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 NAA16Q6N069 864 aaPredicted RBP27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 ZC3H12CQ9C0D7 883 aaKnown RBP27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 CTNNA3Q9UI47 895 aa27.32■■□□□ 1.96
SMARCB1-201ENST00000263121 FGAP02671 866 aa27.31■■□□□ 1.96
SMARCB1-201ENST00000263121 PSMA5P28066 241 aa27.31■■□□□ 1.96
SMARCB1-201ENST00000263121 EYA3Q99504 573 aa27.31■■□□□ 1.96
SMARCB1-201ENST00000263121 RTFDC1Q9BY42 306 aaPredicted RBP27.31■■□□□ 1.96
SMARCB1-201ENST00000263121 ARMT1Q9H993 441 aa27.31■■□□□ 1.96
SMARCB1-201ENST00000263121 RIMBP2O15034 1052 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 DPEP1P16444 411 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 TTLL5Q6EMB2 1281 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 RUFY3Q7L099 469 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 LCORLQ8N3X6 602 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 TTLL6Q8N841 843 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 CYP46A1Q9Y6A2 500 aa27.3■■□□□ 1.96
SMARCB1-201ENST00000263121 ZMYM6O95789 1325 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 FAM205AQ6ZU69 1335 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 GNAT2P19087 354 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 ALX1Q15699 326 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 MIGA1Q8NAN2 632 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 SGIP1Q9BQI5 828 aa27.29■■□□□ 1.96
SMARCB1-201ENST00000263121 A0A0G2JLW4 131 aa27.28■■□□□ 1.96
SMARCB1-201ENST00000263121 CPA1P15085 419 aa27.28■■□□□ 1.96
SMARCB1-201ENST00000263121 RIOK1Q9BRS2 568 aaKnown RBP27.28■■□□□ 1.96
SMARCB1-201ENST00000263121 CHD4Q14839 1912 aa27.28■■□□□ 1.96
SMARCB1-201ENST00000263121 MAGEB6P1A0A0J9YX57 407 aa27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 PATL2C9JE40 543 aaKnown RBP27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 LDHBP07195 334 aaKnown RBP27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 TGFB2P61812 414 aa27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 ZNF219Q9P2Y4 722 aaPredicted RBP27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 STOX1Q6ZVD7 989 aa27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 LAMA4Q16363 1823 aa27.27■■□□□ 1.96
SMARCB1-201ENST00000263121 COL9A3Q14050 684 aaPredicted RBP27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 IMMTQ16891 758 aaKnown RBP27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 BLOC1S2Q6QNY1 142 aa27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 DZIP1Q86YF9 867 aaKnown RBP27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 TBC1D22AQ8WUA7 517 aa27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 NEK1Q96PY6 1258 aa27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 EPB41L4AQ9HCS5 686 aaPredicted RBP27.26■■□□□ 1.95
SMARCB1-201ENST00000263121 GSG1L2A8MUP6 293 aa27.25■■□□□ 1.95
SMARCB1-201ENST00000263121 RPS6KB1P23443 525 aa27.25■■□□□ 1.95
SMARCB1-201ENST00000263121 GRIK5Q16478 980 aa27.25■■□□□ 1.95
SMARCB1-201ENST00000263121 GRIPAP1Q4V328 841 aa27.25■■□□□ 1.95
SMARCB1-201ENST00000263121 PDRG1Q9NUG6 133 aa27.25■■□□□ 1.95
SMARCB1-201ENST00000263121 PSDA5PKW4 1024 aaPredicted RBP27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 C21orf2O43822 256 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 APPP05067 770 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 AK2P54819 239 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 SPRYD3Q8NCJ5 442 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 SLC4A4Q9Y6R1 1079 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 E7EWF7 191 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 PRKAB2O43741 272 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 IFNL3Q8IZI9 196 aa27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 ALDH8A1Q9H2A2 487 aaPredicted RBP27.24■■□□□ 1.95
SMARCB1-201ENST00000263121 DOK7Q18PE1 504 aa27.23■■□□□ 1.95
SMARCB1-201ENST00000263121 TMX3Q96JJ7 454 aa27.23■■□□□ 1.95
SMARCB1-201ENST00000263121 ZNF213O14771 459 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 DYNLL1P63167 89 aaKnown RBP27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 GTF2IP78347 998 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 GSTO1P78417 241 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 CCDC93Q567U6 631 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 MFSD14BQ5SR56 506 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 SUPT20HQ8NEM7 779 aa27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 SLKQ9H2G2 1235 aaPredicted RBP27.22■■□□□ 1.95
SMARCB1-201ENST00000263121 PTGER2P43116 358 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 HAND2P61296 217 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 PODNQ7Z5L7 613 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 BRCA1P38398 1863 aaKnown RBP27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 HMGB1P09429 215 aaKnown RBP27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 NACAP1Q9BZK3 213 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 NBPF3Q9H094 633 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 NAPBQ9H115 298 aa27.21■■□□□ 1.95
SMARCB1-201ENST00000263121 RTKN2Q8IZC4 609 aa27.2■■□□□ 1.94
SMARCB1-201ENST00000263121 PIM2Q9P1W9 311 aa27.2■■□□□ 1.94
SMARCB1-201ENST00000263121 TIAM2Q8IVF5 1701 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 G3V3G9 751 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 DDIT3P35638 169 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 KIAA2012Q0VF49 1180 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 DCAF8Q5TAQ9 597 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 NOL8Q76FK4 1167 aaKnown RBP27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 AATFQ9NY61 560 aaKnown RBP eCLIP27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 SUGT1Q9Y2Z0 365 aa27.19■■□□□ 1.94
SMARCB1-201ENST00000263121 HSP90AA1P07900 732 aaKnown RBP27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 CUL4AQ13619 759 aa27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 PSMD1Q99460 953 aa27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 DBNDD1Q9H9R9 158 aa27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 LIMCH1Q9UPQ0 1083 aa27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 CD2APQ9Y5K6 639 aa27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 ZNF646O15015 1829 aaPredicted RBP27.18■■□□□ 1.94
SMARCB1-201ENST00000263121 MROH7-TTC4A0A0A0MT08 1334 aa27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 LDHCP07864 332 aa27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 DIXDC1Q155Q3 683 aa27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 SDR42E1Q8WUS8 393 aa27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 MYH2Q9UKX2 1941 aa27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 TDO2P48775 406 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms