RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BICD1Q96G01 975 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 USP40Q9NVE5 1235 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 MFSD14BQ5SR56 506 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 XAGE2Q96GT9 111 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 AZI2Q9H6S1 392 aa15.38■□□□□ 0.05
PRPF38A-201ENST00000257181 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 SYCP3Q8IZU3 236 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 LGR6Q9HBX8 967 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 CEP152O94986 1710 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 NEURL1BA8MQ27 555 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 STX6O43752 255 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 CAVIN2O95810 425 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 NBPF3Q9H094 633 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 NUCB1Q02818 461 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 NR1I2O75469 434 aa15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 SETD1BQ9UPS6 1966 aaKnown RBP15.37■□□□□ 0.05
PRPF38A-201ENST00000257181 RGL2O15211 777 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 KRT13P13646 458 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 ABCD1P33897 745 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 HOMER1Q86YM7 354 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 MEIS3Q99687 375 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 EXOC7Q9UPT5 735 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 H0YCG3 227 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 NOP56O00567 594 aaKnown RBP15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 CWF19L2Q2TBE0 894 aaKnown RBP15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 VAT1LQ9HCJ6 419 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 ORC3Q9UBD5 711 aaPredicted RBP15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 MRPL11Q9Y3B7 192 aaKnown RBP15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 SPATA31A5Q5VU36 1347 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 SPATA31A7Q8IWB4 1347 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 USP17L3A6NCW0 530 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 USP17L4A6NCW7 530 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 HAUS3Q68CZ6 603 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 USP17L1Q7RTZ2 530 aa15.36■□□□□ 0.05
PRPF38A-201ENST00000257181 PTPRUQ92729 1446 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 TTC12Q9H892 705 aaPredicted RBP15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 HEATR3Q7Z4Q2 680 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 RSPH3Q86UC2 560 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 CCDC82Q8N4S0 544 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 SERPINC1P01008 464 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 MMP10P09238 476 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 GTF2IP78347 998 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 SUGT1Q9Y2Z0 365 aa15.35■□□□□ 0.05
PRPF38A-201ENST00000257181 PDE1AP54750 535 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 SSH2Q76I76 1423 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 MBD4O95243 580 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 KRT2P35908 639 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 CFAP65Q6ZU64 1925 aaKnown RBP15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 CEP85Q6P2H3 762 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 RGS12O14924 1447 aa15.34■□□□□ 0.05
PRPF38A-201ENST00000257181 PER1O15534 1290 aaPredicted RBP15.33■□□□□ 0.05
PRPF38A-201ENST00000257181 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.05
PRPF38A-201ENST00000257181 ERFEQ4G0M1 354 aa15.33■□□□□ 0.05
PRPF38A-201ENST00000257181 RUFY1Q96T51 708 aa15.33■□□□□ 0.05
PRPF38A-201ENST00000257181 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.05
PRPF38A-201ENST00000257181 ZBTB24O43167 697 aaPredicted RBP15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 PDE4CQ08493 712 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 NEURL4Q96JN8 1562 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 KLF18A0A0U1RQI7 1052 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 hCG_1984214I3L0E3 225 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 KDM4AO75164 1064 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 PDILTQ8N807 584 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 ZNF713Q8N859 430 aaPredicted RBP15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 TBC1D2Q9BYX2 928 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 PRR36Q9H6K5 1346 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 TAF12Q16514 161 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 PODNQ7Z5L7 613 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 COL15A1P39059 1388 aa15.33■□□□□ 0.04
PRPF38A-201ENST00000257181 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 SMTNP53814 917 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 NOM1Q5C9Z4 860 aaKnown RBP15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 LRSAM1Q6UWE0 723 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 IFT74Q96LB3 600 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 ANO10Q9NW15 660 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 SLC1A4P43007 532 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 ZRSR2Q15696 482 aaKnown RBP15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 GALNT17Q6IS24 598 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 PNMA8AQ86V59 439 aaPredicted RBP15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 FDX1P10109 184 aa15.32■□□□□ 0.04
PRPF38A-201ENST00000257181 EIF5P55010 431 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms