RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 GSTA5Q7RTV2 222 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 CCDC50Q8IVM0 306 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 NEK11Q8NG66 645 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 GTPBP4Q9BZE4 634 aaKnown RBP9.86□□□□□ -0.83
PTCD3-201ENST00000254630 ARMT1Q9H993 441 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 CTNND2Q9UQB3 1225 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 EEF2P13639 858 aaKnown RBP9.86□□□□□ -0.83
PTCD3-201ENST00000254630 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 HCLS1P14317 486 aaPredicted RBP9.86□□□□□ -0.83
PTCD3-201ENST00000254630 HIBADHP31937 336 aaKnown RBP9.86□□□□□ -0.83
PTCD3-201ENST00000254630 OTUD6BQ8N6M0 293 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 SLC52A2Q9HAB3 445 aa9.86□□□□□ -0.83
PTCD3-201ENST00000254630 CCDC175P0C221 793 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 TNNI3KQ59H18 835 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 DHX32Q7L7V1 743 aaKnown RBP9.85□□□□□ -0.83
PTCD3-201ENST00000254630 TTC6Q86TZ1 520 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 PPP1R14CQ8TAE6 165 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 DNAJC25Q9H1X3 360 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 FPGT-TNNI3KV9GXZ4 949 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 MAP3K19Q56UN5 1328 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 KIF1BO60333 1816 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 MSANTD4Q8NCY6 345 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 PLIN2Q99541 437 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 RPS6KB1P23443 525 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 AKNAD1Q5T1N1 836 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 TERF1P54274 439 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 ARID5AQ03989 594 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 TSGA10Q9BZW7 698 aa9.85□□□□□ -0.83
PTCD3-201ENST00000254630 CCNT1O60563 726 aaKnown RBP9.84□□□□□ -0.83
PTCD3-201ENST00000254630 TACC1O75410 805 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 CHMLP26374 656 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 CCDC129Q6ZRS4 1044 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 PLEKHM2Q8IWE5 1019 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 XAGE2Q96GT9 111 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SAMD9Q5K651 1589 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 DISP1Q96F81 1524 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 PTGS1P23219 599 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 DACT1Q9NYF0 836 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 RRP9O43818 475 aaKnown RBP9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SYT1P21579 422 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SP4Q02446 784 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 TTC16Q8NEE8 873 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 DDX21Q9NR30 783 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTCD3-201ENST00000254630 A0A1B0GUL7 405 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 KIF4AO95239 1232 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 IL13P35225 146 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 KRT83P78385 493 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 SPECC1LQ69YQ0 1117 aa9.84□□□□□ -0.83
PTCD3-201ENST00000254630 CTAGE9A4FU28 777 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 BACH1O14867 736 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 ZNF174Q15697 407 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CCDC65Q8IXS2 484 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 ZSWIM4Q9H7M6 989 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 H0YIN7 160 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 PPM1EQ8WY54 764 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 FAM89AQ96GI7 184 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 FRMD4BQ9Y2L6 1034 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 ELP1O95163 1332 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CTAGE15A4D2H0 777 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 SLC27A2O14975 620 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CALUO43852 315 aaPredicted RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CTAGE8P0CG41 777 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 EPB41P11171 864 aaKnown RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 ARHGEF5Q12774 1597 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CTAGE6Q86UF2 777 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CTAGE4Q8IX94 777 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CCT6AP40227 531 aaKnown RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 FAM98CQ17RN3 349 aaKnown RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 DCAF17Q5H9S7 520 aaPredicted RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 TBX22Q9Y458 520 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CEP83Q9Y592 693 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 AOX1Q06278 1338 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 MROH5Q6ZUA9 1318 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 B4E1Z4 1266 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 KRT5P13647 590 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
PTCD3-201ENST00000254630 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
PTCD3-201ENST00000254630 CHMP2AO43633 222 aa9.82□□□□□ -0.84
PTCD3-201ENST00000254630 C8orf34Q49A92 452 aa9.82□□□□□ -0.84
PTCD3-201ENST00000254630 GIMAP7Q8NHV1 300 aa9.82□□□□□ -0.84
PTCD3-201ENST00000254630 ZNF830Q96NB3 372 aaPredicted RBP9.82□□□□□ -0.84
PTCD3-201ENST00000254630 STK24Q9Y6E0 443 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms