RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PRIMPOLQ96LW4 560 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 MPHOSPH8Q99549 860 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 TNMDQ9H2S6 317 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 GOLGA6L6A8MZA4 724 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 RASGRF1Q13972 1273 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 TBC1D10CQ8IV04 446 aa25.65■■□□□ 1.7
RNF39-201ENST00000244360 STRBPQ96SI9 672 aaKnown RBP25.65■■□□□ 1.7
RNF39-201ENST00000244360 GOLGA8BA8MQT2 603 aa25.64■■□□□ 1.7
RNF39-201ENST00000244360 TYRO3Q06418 890 aa25.64■■□□□ 1.7
RNF39-201ENST00000244360 NOLC1Q14978 699 aaKnown RBP eCLIP25.64■■□□□ 1.7
RNF39-201ENST00000244360 ILDR1Q86SU0 546 aaPredicted RBP25.64■■□□□ 1.7
RNF39-201ENST00000244360 BICD2Q8TD16 824 aa25.64■■□□□ 1.7
RNF39-201ENST00000244360 NR1I2O75469 434 aa25.64■■□□□ 1.69
RNF39-201ENST00000244360 FAM200AQ8TCP9 573 aa25.64■■□□□ 1.69
RNF39-201ENST00000244360 ZNF396Q96N95 335 aaPredicted RBP25.64■■□□□ 1.69
RNF39-201ENST00000244360 SPTLC3Q9NUV7 552 aa25.64■■□□□ 1.69
RNF39-201ENST00000244360 NIP7Q9Y221 180 aaKnown RBP eCLIP25.64■■□□□ 1.69
RNF39-201ENST00000244360 MRVI1Q9Y6F6 885 aa25.64■■□□□ 1.69
RNF39-201ENST00000244360 RGS22Q8NE09 1264 aa25.63■■□□□ 1.69
RNF39-201ENST00000244360 A0A0G2JS52 829 aa25.63■■□□□ 1.69
RNF39-201ENST00000244360 FOSBP53539 338 aa25.63■■□□□ 1.69
RNF39-201ENST00000244360 TRDNQ13061 729 aa25.63■■□□□ 1.69
RNF39-201ENST00000244360 CAMK4Q16566 473 aa25.63■■□□□ 1.69
RNF39-201ENST00000244360 DNTTIP2Q5QJE6 756 aaKnown RBP25.63■■□□□ 1.69
RNF39-201ENST00000244360 USP28Q96RU2 1077 aa25.62■■□□□ 1.69
RNF39-201ENST00000244360 BCL9LQ86UU0 1499 aa25.62■■□□□ 1.69
RNF39-201ENST00000244360 C4AP0C0L4 1744 aa25.62■■□□□ 1.69
RNF39-201ENST00000244360 C4BP0C0L5 1744 aa25.62■■□□□ 1.69
RNF39-201ENST00000244360 FAM177BA6PVY3 158 aa25.61■■□□□ 1.69
RNF39-201ENST00000244360 IGHMBP2P38935 993 aaKnown RBP25.61■■□□□ 1.69
RNF39-201ENST00000244360 MAP3K12Q12852 859 aa25.61■■□□□ 1.69
RNF39-201ENST00000244360 AIDAQ96BJ3 306 aa25.61■■□□□ 1.69
RNF39-201ENST00000244360 ANGEL1Q9UNK9 670 aaKnown RBP25.61■■□□□ 1.69
RNF39-201ENST00000244360 MYRIPQ8NFW9 859 aa25.6■■□□□ 1.69
RNF39-201ENST00000244360 TTC12Q9H892 705 aaPredicted RBP25.6■■□□□ 1.69
RNF39-201ENST00000244360 ZNF652Q9Y2D9 606 aa25.6■■□□□ 1.69
RNF39-201ENST00000244360 SH2B2O14492 632 aaPredicted RBP25.6■■□□□ 1.69
RNF39-201ENST00000244360 CLEC4GQ6UXB4 293 aa25.6■■□□□ 1.69
RNF39-201ENST00000244360 FTOQ9C0B1 505 aaKnown RBP eCLIP25.6■■□□□ 1.69
RNF39-201ENST00000244360 TIAM2Q8IVF5 1701 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 SNAP23O00161 211 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 GUCY1B3Q02153 619 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 CYB5R4Q7L1T6 521 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 PATL2C9JE40 543 aaKnown RBP25.59■■□□□ 1.69
RNF39-201ENST00000244360 APPP05067 770 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 CKAP2LQ8IYA6 745 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 ZNF830Q96NB3 372 aaPredicted RBP25.59■■□□□ 1.69
RNF39-201ENST00000244360 EPB41L4AQ9HCS5 686 aaPredicted RBP25.59■■□□□ 1.69
RNF39-201ENST00000244360 ORC3Q9UBD5 711 aaPredicted RBP25.59■■□□□ 1.69
RNF39-201ENST00000244360 DENND2AQ9ULE3 1009 aa25.59■■□□□ 1.69
RNF39-201ENST00000244360 AP5Z1O43299 807 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 PPFIA3O75145 1194 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 MAGEB6Q8N7X4 407 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 FBXO18Q8NFZ0 1043 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 NKX2-3Q8TAU0 364 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 C8orf76Q96K31 380 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 FAM13BQ9NYF5 915 aa25.58■■□□□ 1.69
RNF39-201ENST00000244360 NUTM2BA6NNL0 878 aaPredicted RBP25.57■■□□□ 1.68
RNF39-201ENST00000244360 NUTM2EB1AL46 878 aaPredicted RBP25.57■■□□□ 1.68
RNF39-201ENST00000244360 RBM10P98175 930 aaKnown RBP25.57■■□□□ 1.68
RNF39-201ENST00000244360 PLCB2Q00722 1185 aa25.57■■□□□ 1.68
RNF39-201ENST00000244360 CEBPZQ03701 1054 aaKnown RBP25.57■■□□□ 1.68
RNF39-201ENST00000244360 NUTM2AQ8IVF1 878 aaPredicted RBP25.57■■□□□ 1.68
RNF39-201ENST00000244360 TMEM87BQ96K49 555 aa25.57■■□□□ 1.68
RNF39-201ENST00000244360 KCNQ2O43526 872 aa25.57■■□□□ 1.68
RNF39-201ENST00000244360 RTEL1Q9NZ71 1219 aa25.57■■□□□ 1.68
RNF39-201ENST00000244360 COL4A1P02462 1669 aa25.57■■□□□ 1.68
RNF39-201ENST00000244360 CPLX1O14810 134 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 RGL2O15211 777 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 MBD4O95243 580 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 CHRNDQ07001 517 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 NEDD4P46934 1319 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 PNPLA7Q6ZV29 1317 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 IFNL3Q8IZI9 196 aa25.56■■□□□ 1.68
RNF39-201ENST00000244360 CAVIN2O95810 425 aa25.55■■□□□ 1.68
RNF39-201ENST00000244360 BCAMP50895 628 aa25.55■■□□□ 1.68
RNF39-201ENST00000244360 CCAR1Q8IX12 1150 aaKnown RBP25.55■■□□□ 1.68
RNF39-201ENST00000244360 CDC5LQ99459 802 aaKnown RBP25.55■■□□□ 1.68
RNF39-201ENST00000244360 ANO6Q4KMQ2 910 aa25.55■■□□□ 1.68
RNF39-201ENST00000244360 BRAPQ7Z569 592 aa25.55■■□□□ 1.68
RNF39-201ENST00000244360 GOLPH3LQ9H4A5 285 aa25.55■■□□□ 1.68
RNF39-201ENST00000244360 B4E1Z4 1266 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 CTAGE5O15320 804 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 GTF2F1P35269 517 aaKnown RBP eCLIP25.54■■□□□ 1.68
RNF39-201ENST00000244360 APOA5Q6Q788 366 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 SGMS1Q86VZ5 419 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 LINC00116Q8NCU8 138 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 ENGASEQ8NFI3 743 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 IGDCC4Q8TDY8 1250 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 CBX8Q9HC52 389 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 ZNF804BA4D1E1 1349 aa25.54■■□□□ 1.68
RNF39-201ENST00000244360 GNAT2P19087 354 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 SNW1Q13573 536 aaKnown RBP25.53■■□□□ 1.68
RNF39-201ENST00000244360 KIAA1524Q8TCG1 905 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 NAPBQ9H115 298 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 A0A1B0GUL6 1792 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 GSG1L2A8MUP6 293 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 SF3B3Q15393 1217 aaKnown RBP25.53■■□□□ 1.68
RNF39-201ENST00000244360 OTUD7BQ6GQQ9 843 aa25.53■■□□□ 1.68
RNF39-201ENST00000244360 RAB11FIP4Q86YS3 637 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms