RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 H0YIN7 160 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
COPA-201ENST00000241704 CAPN2P17655 700 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 ZNF75DP51815 510 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 MNAT1P51948 309 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 Q6ZUG5 572 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 AK2P54819 239 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 VAT1LQ9HCJ6 419 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 RAD51AP2Q09MP3 1159 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 QRICH2Q9H0J4 1663 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 SGSM2O43147 1006 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 GNAT2P19087 354 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 KIF5BP33176 963 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 LRMPQ12912 555 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 ESR2Q92731 530 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
COPA-201ENST00000241704 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 ADGRL3Q9HAR2 1447 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.49e-6■■■■□ 21.7
COPA-201ENST00000241704 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
COPA-201ENST00000241704 WTAPQ15007 396 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 CTAGE5O15320 804 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 ZBTB43O43298 467 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 CCDC150Q8NCX0 1101 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
COPA-201ENST00000241704 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
COPA-201ENST00000241704 RUFY3Q7L099 469 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 ARHGEF40Q8TER5 1519 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
COPA-201ENST00000241704 ICE2Q659A1 982 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 GBP3Q9H0R5 595 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 STX1AQ16623 288 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 FLAD1Q8NFF5 587 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 XAGE2Q96GT9 111 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
COPA-201ENST00000241704 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 PRC1O43663 620 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 UFL1O94874 794 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 PLCG2P16885 1265 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 PUM3Q15397 648 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 GPR162Q16538 588 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 OAS2P29728 719 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 NLRP5P59047 1200 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 GSPT1P15170 499 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 PTPRMP28827 1452 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 SMARCE1Q969G3 411 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 SLC26A6Q9BXS9 759 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 MAGEB6Q8N7X4 407 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
COPA-201ENST00000241704 FEZ2Q9UHY8 353 aaPredicted RBP12.53□□□□□ -0.4
COPA-201ENST00000241704 DLC1Q96QB1 1528 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 PPFIA3O75145 1194 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.4
COPA-201ENST00000241704 BRINP3Q76B58 766 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 FSIP1Q8NA03 581 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.4
COPA-201ENST00000241704 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 CBX8Q9HC52 389 aa12.52□□□□□ -0.4
COPA-201ENST00000241704 ERCC6LQ2NKX8 1250 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 PROSER3Q2NL68 480 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■■ 50.1
COPA-201ENST00000241704 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
COPA-201ENST00000241704 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 ATP5JP18859 108 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms