RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 GABPB1Q06547 395 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NEDD9Q14511 834 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 KCNK9Q9NPC2 374 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 HSPA1LP34931 641 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 MAK16Q9BXY0 300 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 VAT1LQ9HCJ6 419 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 GOLGA6AQ9NYA3 693 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 RRP36Q96EU6 259 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 IFNKQ9P0W0 207 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 C6orf229H3BNL8 230 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 C8orf74Q6P047 294 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 UTP11Q9Y3A2 253 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 RP1L1Q8IWN7 2480 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PI4KAP2A4QPH2 592 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NDUFAB1O14561 156 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 CRCPO75575 148 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PCK1P35558 622 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 ZNF804AQ7Z570 1209 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PI4KAP1Q8N8J0 262 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NAPGQ99747 312 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 BAG1Q99933 345 aaPredicted RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 RBM8AQ9Y5S9 174 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 KDM5AP29375 1690 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 KIF21AQ7Z4S6 1674 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 SPDYE3A6NKU9 549 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 SMARCC2Q8TAQ2 1214 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NOX5Q96PH1 765 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 NCBP1Q09161 790 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PPFIA1Q13136 1202 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 KRT79Q5XKE5 535 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 ZNF354CQ86Y25 554 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 SNRKQ9NRH2 765 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 PAG1Q9NWQ8 432 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 TTF2Q9UNY4 1162 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 FRMD4BQ9Y2L6 1034 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 ZFYVE9O95405 1425 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 CETN3O15182 167 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 CLNS1AP54105 237 aaKnown RBP7.58□□□□□ -1.2
CSMD2-201ENST00000241312 CEP85LQ5SZL2 805 aa7.58□□□□□ -1.2
CSMD2-201ENST00000241312 STK10O94804 968 aaKnown RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 IFT20Q8IY31 132 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 SNRPA1P09661 255 aaKnown RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 KIFAP3Q92845 792 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 DHX58Q96C10 678 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 DISP3Q9P2K9 1392 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 INPP5BP32019 993 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 CFAP43Q8NDM7 1665 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 WASLO00401 505 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 ZC3H6P61129 1189 aaKnown RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 PHLDB2Q86SQ0 1253 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 FEZ2Q9UHY8 353 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 TMEM110-MUSTN1A8MSY1 372 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 PPP1R2P41236 205 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 PPARDQ03181 441 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 GOLGA6BA6NDN3 693 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 TNNI2P48788 182 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 CCDC38Q502W7 563 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 IGSF22Q8N9C0 903 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 NUP160Q12769 1436 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 SARNPP82979 210 aaKnown RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 MAP7Q14244 749 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 GABPB2Q8TAK5 448 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 VCX3AQ9NNX9 186 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 EPB41P11171 864 aaKnown RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 IL15P40933 162 aaPredicted RBP7.57□□□□□ -1.2
CSMD2-201ENST00000241312 EPSTI1Q96J88 318 aa7.57□□□□□ -1.2
CSMD2-201ENST00000241312 CNGA1P29973 690 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 CYP26C1Q6V0L0 522 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 NOS1P29475 1434 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 MYL5Q02045 173 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ST5P78524 1137 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 NAP1L4Q99733 375 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 FAM169AQ9Y6X4 670 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 MTMR3Q13615 1198 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ATP2B3Q16720 1220 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 PFDN4Q9NQP4 134 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ARHGEF12Q9NZN5 1544 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 UTP14CQ5TAP6 766 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 FAM114A2Q9NRY5 505 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 SLC4A4Q9Y6R1 1079 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 URB1O60287 2271 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 EVCP57679 992 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 KARSQ15046 597 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 CEP120Q8N960 986 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms