RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 SEMA3FQ13275 785 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 NFIXQ14938 502 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 GORABQ5T7V8 394 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 TBC1D9BQ66K14 1250 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 TTLL7Q6ZT98 887 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 SMC5Q8IY18 1101 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 EXOC6Q8TAG9 804 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 TSC1Q92574 1164 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 CDHR5Q9HBB8 845 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 HMX1Q9NP08 348 aaPredicted RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 ZNF609O15014 1411 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 PTPRCP08575 1304 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 CDHR2Q9BYE9 1310 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 DICER1Q9UPY3 1922 aaKnown RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 SPTLC1O15269 473 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 IGKV5-2P06315 115 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SCNN1AP37088 669 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 CT47A1Q5JQC4 288 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 TRAPPC3LQ5T215 181 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 USPL1Q5W0Q7 1092 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 G2E3Q7L622 706 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 RIC3Q7Z5B4 369 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 DHX38Q92620 1227 aaKnown RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SLKQ9H2G2 1235 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 COL4A5P29400 1685 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 ADAMTSL1Q8N6G6 1762 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 OS9Q13438 667 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 TSNAXIP1Q2TAA8 658 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 BEND3Q5T5X7 828 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 CCDC30Q5VVM6 783 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 ZSCAN30Q86W11 494 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 TMTC2Q8N394 836 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SSH1Q8WYL5 1049 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 TSPYL2Q9H2G4 693 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 CD2APQ9Y5K6 639 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 IRS2Q9Y4H2 1338 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SBF1O95248 1867 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SLX4Q8IY92 1834 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 PEX14O75381 377 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 RBL2Q08999 1139 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 ZNF771Q7L3S4 317 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 DZIP3Q86Y13 1208 aaKnown RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 XAGE3Q8WTP9 111 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 STAG1Q8WVM7 1258 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SPIRE2Q8WWL2 714 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 ARMC5Q96C12 935 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 GMLQ99445 158 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 METTL22Q9BUU2 404 aaPredicted RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 PHAXQ9H814 394 aaKnown RBP4.41□□□□□ -1.7
UFM1-201ENST00000239878 TFCP2L1Q9NZI6 479 aa4.41□□□□□ -1.7
UFM1-201ENST00000239878 SPEF2Q9C093 1822 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 PSDA5PKW4 1024 aaPredicted RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 TULP2O00295 520 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 MAP3K13O43283 966 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 HOXA10P31260 410 aaPredicted RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 ANAPC15P60006 121 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 SETQ01105 290 aaPredicted RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 TCIRG1Q13488 830 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 C9orf131Q5VYM1 1079 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 METTL3Q86U44 580 aaKnown RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 NLRP10Q86W26 655 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 GAS2L3Q86XJ1 694 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 C7orf43Q8WVR3 580 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 MAGEC2Q9UBF1 373 aaPredicted RBP4.4□□□□□ -1.7
UFM1-201ENST00000239878 RPS6KL1Q9Y6S9 549 aa4.4□□□□□ -1.7
UFM1-201ENST00000239878 SENP3-EIF4A1A0A087X0R7 540 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 H7C1W4 665 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 PTMSP20962 102 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 PIP4K2AP48426 406 aaPredicted RBP4.4□□□□□ -1.71
UFM1-201ENST00000239878 PRR5LQ6MZQ0 368 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 RSBN1LQ6PCB5 846 aaPredicted RBP4.4□□□□□ -1.71
UFM1-201ENST00000239878 KSR2Q6VAB6 950 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 MORC4Q8TE76 937 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 KAZALD1Q96I82 304 aa4.4□□□□□ -1.71
UFM1-201ENST00000239878 CACNA1SQ13698 1873 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 APLP1P51693 650 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 INTS3Q68E01 1043 aaKnown RBP4.39□□□□□ -1.71
UFM1-201ENST00000239878 COPS6Q7L5N1 327 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 NEURL1BA8MQ27 555 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 ATP9BO43861 1147 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 TGFB2P61812 414 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 RABL6Q3YEC7 729 aaPredicted RBP4.39□□□□□ -1.71
UFM1-201ENST00000239878 C8orf34Q49A92 452 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 PARP10Q53GL7 1025 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 SUSD4Q5VX71 490 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 C3orf67Q6ZVT6 689 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 DDX12PQ92771 950 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 TANGO6Q9C0B7 1094 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 ANTXR1Q9H6X2 564 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 SPON1Q9HCB6 807 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 WDR90Q96KV7 1748 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 ANXA1P04083 346 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 PCCAP05165 728 aaPredicted RBP4.39□□□□□ -1.71
UFM1-201ENST00000239878 CSF1RP07333 972 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 MMP10P09238 476 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 MSNP26038 577 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms