RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 NUCB1Q02818 461 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 SFSWAPQ12872 951 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 TMED1Q13445 227 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 CCDC93Q567U6 631 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 CWC27Q6UX04 472 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 CPSF1Q10570 1443 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 KCNQ3O43525 872 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 LMOD1P29536 600 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 PSME1Q06323 249 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 SPATA21Q7Z572 469 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 MAB21L3Q8N8X9 362 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 C3orf20Q8ND61 904 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 GPATCH3Q96I76 525 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 MS4A4AQ96JQ5 239 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 CABS1Q96KC9 395 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 UTP6Q9NYH9 597 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 ODF2LQ9ULJ1 636 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 NSFL1CQ9UNZ2 370 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 ATXN2Q99700 1313 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 MAP4K4O95819 1239 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 PIP4K2AP48426 406 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 ZC3H6P61129 1189 aaKnown RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 NEXNQ0ZGT2 675 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 TPD52L1Q16890 204 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 ALDH1L2Q3SY69 923 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 PLEKHO1Q53GL0 409 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 NAALADL2Q58DX5 795 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 THEMISQ8N1K5 641 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 TBC1D5Q92609 795 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 ZKSCAN4Q969J2 545 aaPredicted RBP6.54□□□□□ -1.36
RFX4-201ENST00000229387 BATF3Q9NR55 127 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 KLHL42Q9P2K6 505 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 NEURL4Q96JN8 1562 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 ADAMTS13Q76LX8 1427 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 NEMFO60524 1076 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 PEX14O75381 377 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
RFX4-201ENST00000229387 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 CXorf38Q8TB03 319 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 TRIM7Q9C029 511 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
RFX4-201ENST00000229387 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 ABCF2Q9UG63 623 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFX4-201ENST00000229387 USTQ9Y2C2 406 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 PDLIM1O00151 329 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 SMAPO00193 183 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 IQCB1Q15051 598 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
RFX4-201ENST00000229387 MYSM1Q5VVJ2 828 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 TBC1D9Q6ZT07 1266 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 MAGEC3Q8TD91 643 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 SAAL1Q96ER3 474 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 CHAMP1Q96JM3 812 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 IL1RAPL2Q9NP60 686 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 CREBZFQ9NS37 354 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 FRMD4BQ9Y2L6 1034 aa6.53□□□□□ -1.36
RFX4-201ENST00000229387 GCKP35557 465 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 DEUP1Q05D60 604 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CCDC15Q0P6D6 951 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 PTPN14Q15678 1187 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 MFSD4BQ5TF39 518 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 GET4Q7L5D6 327 aaPredicted RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 IQCA1Q86XH1 822 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CABLES1Q8TDN4 633 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 EZH1Q92800 747 aaPredicted RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 XAGE2Q96GT9 111 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 KIF9Q9HAQ2 790 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 ZCCHC17Q9NP64 241 aaKnown RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 ORC3Q9UBD5 711 aaPredicted RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 PRAMEF22A3QJZ6 481 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CHL1O00533 1208 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 EPB41L2O43491 1005 aaKnown RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 GSPT1P15170 499 aaKnown RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
RFX4-201ENST00000229387 SERPINB4P48594 390 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 PDIA6Q15084 440 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CCDC183Q5T5S1 534 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 PARD3BQ8TEW8 1205 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 DDX12PQ92771 950 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 BICD1Q96G01 975 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 CCDC34Q96HJ3 373 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 TMX3Q96JJ7 454 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 ZDHHC9Q9Y397 364 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 PPME1Q9Y570 386 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 ATP7BP35670 1465 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 ERCC6LQ2NKX8 1250 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 TLDC1Q6P9B6 456 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 FOXR1Q6PIV2 292 aa6.52□□□□□ -1.37
RFX4-201ENST00000229387 DPH6Q7L8W6 267 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms