RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DNAJC10Q8IXB1 793 aa18.95■□□□□ 0.62
LTBR-201ENST00000228918 ANKRD7Q92527 254 aa18.95■□□□□ 0.62
LTBR-201ENST00000228918 NAT10Q9H0A0 1025 aaKnown RBP18.95■□□□□ 0.62
LTBR-201ENST00000228918 RIPOR2Q9Y4F9 1068 aa18.95■□□□□ 0.62
LTBR-201ENST00000228918 MYO5AQ9Y4I1 1855 aaKnown RBP18.95■□□□□ 0.62
LTBR-201ENST00000228918 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
LTBR-201ENST00000228918 CPLX1O14810 134 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 SPTLC2O15270 562 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 RBM6P78332 1123 aaKnown RBP18.94■□□□□ 0.62
LTBR-201ENST00000228918 ARID5BQ14865 1188 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 METTL24Q5JXM2 366 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 RAB11FIP4Q86YS3 637 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 SDF4Q9BRK5 362 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.94■□□□□ 0.621e-6■■■□□ 15.4
LTBR-201ENST00000228918 NBPF3Q9H094 633 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 ADD2P35612 726 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
LTBR-201ENST00000228918 DMTNQ08495 405 aa18.94■□□□□ 0.62
LTBR-201ENST00000228918 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
LTBR-201ENST00000228918 MAP3K15Q6ZN16 1313 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 GIGYF2Q6Y7W6 1299 aaKnown RBP18.93■□□□□ 0.62
LTBR-201ENST00000228918 RGS22Q8NE09 1264 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 GJB4Q9NTQ9 266 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 KIAA1468Q9P260 1216 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 TPD52L1Q16890 204 aaPredicted RBP18.93■□□□□ 0.62
LTBR-201ENST00000228918 SYNE4Q8N205 404 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 ZNF512BQ96KM6 892 aaPredicted RBP18.93■□□□□ 0.62
LTBR-201ENST00000228918 STRN4Q9NRL3 753 aa18.93■□□□□ 0.62
LTBR-201ENST00000228918 ITGA6P23229 1130 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 TTLL11Q8NHH1 800 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 BPIFA3Q9BQP9 254 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 GREM2Q9H772 168 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 ASAP1Q9ULH1 1129 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 ITGB4P16144 1822 aa18.92■□□□□ 0.62
LTBR-201ENST00000228918 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
LTBR-201ENST00000228918 CCZ1BP86790 482 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 CCZ1P86791 482 aaPredicted RBP18.91■□□□□ 0.62
LTBR-201ENST00000228918 DPCR1Q3MIW9 517 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 LDHAL6AQ6ZMR3 332 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 VGLL2Q8N8G2 317 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 ZMYM6O95789 1325 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 AXDND1Q5T1B0 1012 aaPredicted RBP18.91■□□□□ 0.62
LTBR-201ENST00000228918 SYNE3Q6ZMZ3 975 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 NLRP10Q86W26 655 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 DENND2AQ9ULE3 1009 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 ANGEL1Q9UNK9 670 aaKnown RBP18.91■□□□□ 0.62
LTBR-201ENST00000228918 PAXBP1Q9Y5B6 917 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 LRP6O75581 1613 aa18.91■□□□□ 0.62
LTBR-201ENST00000228918 CTSWP56202 376 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 TRDNQ13061 729 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 SYCP1Q15431 976 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 HLFQ16534 295 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 PIGBQ92521 554 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 SH2B2O14492 632 aaPredicted RBP18.9■□□□□ 0.62
LTBR-201ENST00000228918 STARD3NLO95772 234 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 SKILP12757 684 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 GPTP24298 496 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 TTF1Q15361 905 aaPredicted RBP18.9■□□□□ 0.62
LTBR-201ENST00000228918 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 PRDM10Q9NQV6 1147 aa18.9■□□□□ 0.62
LTBR-201ENST00000228918 ANKRD18BA2A2Z9 1011 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 USP27XA6NNY8 438 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 ZNF202O95125 648 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 UBE3CQ15386 1083 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 PPP4R3BQ5MIZ7 849 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 CYB5R4Q7L1T6 521 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 NBPF11Q86T75 865 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 NKX2-3Q8TAU0 364 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 PIH1D3Q9NQM4 214 aaKnown RBP18.89■□□□□ 0.61
LTBR-201ENST00000228918 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 MROH7-TTC4A0A0A0MT08 1334 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 ARAP2Q8WZ64 1704 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 PFKFB1P16118 471 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 CMA1P23946 247 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 NCBP1Q09161 790 aaKnown RBP18.89■□□□□ 0.61
LTBR-201ENST00000228918 ZRSR1Q15695 479 aaKnown RBP18.89■□□□□ 0.61
LTBR-201ENST00000228918 LRP5O75197 1615 aa18.89■□□□□ 0.61
LTBR-201ENST00000228918 SLC3A2P08195 630 aaKnown RBP18.88■□□□□ 0.61
LTBR-201ENST00000228918 METAP2P50579 478 aaKnown RBP eCLIP18.88■□□□□ 0.61
LTBR-201ENST00000228918 GSDMDP57764 484 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 CEP135Q66GS9 1140 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 NYAP1Q6ZVC0 841 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 OSBPL5Q9H0X9 879 aaPredicted RBP18.88■□□□□ 0.61
LTBR-201ENST00000228918 NUP98P52948 1817 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 EVA1CP58658 441 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 NLRP12P59046 1061 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 CCDC112Q8NEF3 446 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
LTBR-201ENST00000228918 CHD4Q14839 1912 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
LTBR-201ENST00000228918 CDKL5O76039 1030 aa18.87■□□□□ 0.61
LTBR-201ENST00000228918 SLC39A14Q15043 492 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms