RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 THSD7AQ9UPZ6 1657 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
CCL1-201ENST00000225842 PLSCR1O15162 318 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 DNAJA1P31689 397 aaKnown RBP9.78□□□□□ -0.84
CCL1-201ENST00000225842 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
CCL1-201ENST00000225842 HIF1AQ16665 826 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 ZNF598Q86UK7 904 aaKnown RBP9.78□□□□□ -0.84
CCL1-201ENST00000225842 CCDC74AQ96AQ1 378 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 DMGDHQ9UI17 866 aaKnown RBP9.78□□□□□ -0.84
CCL1-201ENST00000225842 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.84
CCL1-201ENST00000225842 DLC1Q96QB1 1528 aa9.77□□□□□ -0.84
CCL1-201ENST00000225842 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
CCL1-201ENST00000225842 ATP2B1P20020 1258 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 GPC1P35052 558 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCL1-201ENST00000225842 RACK1P63244 317 aaKnown RBP9.77□□□□□ -0.85
CCL1-201ENST00000225842 ZNF438Q7Z4V0 828 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
CCL1-201ENST00000225842 MEIOBQ8N635 442 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 OSBPL7Q9BZF2 842 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 C12orf49Q9H741 205 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 POLMQ9NP87 494 aaPredicted RBP9.77□□□□□ -0.85
CCL1-201ENST00000225842 STK32BQ9NY57 414 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 ZDHHC3Q9NYG2 299 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 INPP5FQ9Y2H2 1132 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 MYOM1P52179 1685 aa9.77□□□□□ -0.85
CCL1-201ENST00000225842 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
CCL1-201ENST00000225842 RNF144AP50876 292 aaPredicted RBP9.76□□□□□ -0.85
CCL1-201ENST00000225842 PRELPP51888 382 aa9.76□□□□□ -0.85
CCL1-201ENST00000225842 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
CCL1-201ENST00000225842 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
CCL1-201ENST00000225842 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
CCL1-201ENST00000225842 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
CCL1-201ENST00000225842 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
CCL1-201ENST00000225842 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
CCL1-201ENST00000225842 ARSDP51689 593 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 EVA1CP58658 441 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 TRIP4Q15650 581 aaPredicted RBP9.75□□□□□ -0.85
CCL1-201ENST00000225842 CHRNA2Q15822 529 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 MEI1Q5TIA1 1274 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 IER5Q5VY09 327 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
CCL1-201ENST00000225842 PHACTR2O75167 634 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 POLR3DP05423 398 aaPredicted RBP9.74□□□□□ -0.85
CCL1-201ENST00000225842 INPP5BP32019 993 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 POU4F2Q12837 409 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 SLC15A2Q16348 729 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 CYP4X1Q8N118 509 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 ZFYVE28Q9HCC9 887 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 NEUROD4Q9HD90 331 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
CCL1-201ENST00000225842 PLEKHH1Q9ULM0 1364 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
CCL1-201ENST00000225842 TECPR2O15040 1411 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 CTSOP43234 321 aaPredicted RBP9.73□□□□□ -0.85
CCL1-201ENST00000225842 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 BTLAQ7Z6A9 289 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 TSEN34Q9BSV6 310 aaKnown RBP9.73□□□□□ -0.85
CCL1-201ENST00000225842 LNPKQ9C0E8 428 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 ELP3Q9H9T3 547 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 NPHS2Q9NP85 383 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 TMEM63CQ9P1W3 806 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
CCL1-201ENST00000225842 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
CCL1-201ENST00000225842 CHD4Q14839 1912 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 SPATA31C2B4DYI2 1134 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 GRIN3BO60391 1043 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 USP17L7P0C7H9 530 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 ATP4AP20648 1035 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 ARSJQ5FYB0 599 aaPredicted RBP9.72□□□□□ -0.85
CCL1-201ENST00000225842 XKR5Q6UX68 686 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
CCL1-201ENST00000225842 SRA1Q9HD15 236 aaKnown RBP9.72□□□□□ -0.85
CCL1-201ENST00000225842 KCNMB2Q9Y691 235 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 RPGRIP1LQ68CZ1 1315 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 KIAA0232Q92628 1395 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 ATP10DQ9P241 1426 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 NRXN1Q9ULB1 1477 aa9.72□□□□□ -0.85
CCL1-201ENST00000225842 GOLGB1Q14789 3259 aaKnown RBP9.71□□□□□ -0.85
CCL1-201ENST00000225842 CASZ1Q86V15 1759 aa9.71□□□□□ -0.85
CCL1-201ENST00000225842 GIPC1O14908 333 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 SPINT1O43278 529 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 SMPD1P17405 629 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 ARID5AQ03989 594 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 PTPN12Q05209 780 aaKnown RBP9.71□□□□□ -0.86
CCL1-201ENST00000225842 TAF1CQ15572 869 aaPredicted RBP9.71□□□□□ -0.86
CCL1-201ENST00000225842 PDE12Q6L8Q7 609 aaKnown RBP9.71□□□□□ -0.86
CCL1-201ENST00000225842 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
CCL1-201ENST00000225842 GIMAP6Q6P9H5 292 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms