RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 DDX49Q9Y6V7 483 aaKnown RBP16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 FSD2A1L4K1 749 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 EPB41L4AQ9HCS5 686 aaPredicted RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 GSG1L2A8MUP6 293 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 APPP05067 770 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 SCRN1Q12765 414 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 ARMT1Q9H993 441 aa16.9■□□□□ 0.3
RTFDC1-201ENST00000023939 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 PRC1O43663 620 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 MBD3O95983 291 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 CYP7A1P22680 504 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 KLRK1P26718 216 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 PDIA3P30101 505 aaKnown RBP16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 ANTXR2P58335 489 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 DDR1Q08345 913 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 TRDNQ13061 729 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 STK3Q13188 491 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 TBC1D10CQ8IV04 446 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
RTFDC1-201ENST00000023939 XDHP47989 1333 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 RXRBP28702 533 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 HMGN5P82970 282 aaKnown RBP16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 NAPBQ9H115 298 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
RTFDC1-201ENST00000023939 BBOX1O75936 387 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 ABCF2Q9UG63 623 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 NSUN7Q8NE18 718 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
RTFDC1-201ENST00000023939 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 APBA3O96018 575 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 ADGRA1Q86SQ6 560 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 TMEM87BQ96K49 555 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 MTA3Q9BTC8 594 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 TFCP2L1Q9NZI6 479 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 KIF3AQ9Y496 699 aa16.86■□□□□ 0.29
RTFDC1-201ENST00000023939 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 GOLGA6L3A6NEY3 463 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 JAK2O60674 1132 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 NAA16Q6N069 864 aaPredicted RBP16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 CHST3Q7LGC8 479 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 NSUN4Q96CB9 384 aaKnown RBP16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
RTFDC1-201ENST00000023939 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 PRKAB2O43741 272 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 TXNRD3Q86VQ6 643 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 MAST2Q6P0Q8 1798 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 SH2B2O14492 632 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 ZNF445P59923 1031 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 USP48Q86UV5 1035 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 BRIP1Q9BX63 1249 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 KRT23Q9C075 422 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
RTFDC1-201ENST00000023939 MYH13Q9UKX3 1938 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 TDO2P48775 406 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms