RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Rnf20Q5DTM8 973 aa28.84■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Nfe2l3Q9WTM4 660 aa28.84■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Col20a1Q923P0 1320 aa28.84■■■□□ 2.21
Pcf11-205ENSMUST00000208255 FAM186AQ9D9R9 1790 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Sik3Q6P4S6 1311 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Atf7Q8R0S1 413 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 IcoslgQ9JHJ8 322 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Kcna3P16390 528 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Znf428Q8C1M2 176 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Adam1bQ8R534 806 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Uba5Q8VE47 403 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Slx4ipQ9D7Y9 413 aa28.83■■■□□ 2.21
Pcf11-205ENSMUST00000208255 Frmd7A2AD83 703 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Phactr2B1AVP0 632 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Rnf180Q3U827 592 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Olfm5Q8BU90 496 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Ccdc7Q9D541 371 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Megf6Q80V70 1572 aa28.82■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Map9Q3TRR0 646 aa28.81■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Utp18Q5SSI6 552 aaKnown RBP28.81■■■□□ 2.2
Pcf11-205ENSMUST00000208255 AsnsQ61024 561 aa28.81■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Alx1Q8C8B0 326 aa28.81■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Krt24A1L317 512 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Fbxl16A2RT62 479 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Prl7a2O54831 253 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 NogP97466 232 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Gjb2Q00977 226 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Sp8Q8BMJ8 486 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Lmod1Q8BVA4 595 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Cxcl11Q9JHH5 100 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Col1a1P11087 1453 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Catsper2A2ARP9 588 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Psmd14O35593 310 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Gm2163Q6PCY5 473 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Ccdc93Q7TQK5 629 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Cdca7lQ922M5 438 aa28.8■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Scn9aQ62205 1984 aa28.79■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Eif6O55135 245 aa28.79■■■□□ 2.2
Pcf11-205ENSMUST00000208255 EvcP57680 1005 aa28.79■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Cyp24a1Q64441 514 aa28.79■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Pcdhb5Q91XZ5 792 aa28.78■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Rbm6S4R1W5 1118 aaKnown RBP28.78■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Adam7O35227 789 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Tti2Q8BGV4 512 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Ecm29Q6PDI5 1840 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Vwa3bJ9JI28 736 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Large2Q5XPT3 690 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Shisa4Q8CA71 197 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Cypt1Q8CH20 168 aa28.77■■■□□ 2.2
Pcf11-205ENSMUST00000208255 Lrch1P62046 709 aa28.76■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Ints3Q7TPD0 1041 aaKnown RBP28.76■■■□□ 2.19
Pcf11-205ENSMUST00000208255 ParnQ8VDG3 624 aa28.76■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Klf15Q9EPW2 415 aa28.76■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Arid4aF8VPQ2 1261 aaKnown RBP28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Rfx1P48377 963 aa28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Cdcp1Q5U462 833 aa28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Mxd3Q80US8 206 aa28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Mboat7Q8CHK3 473 aa28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Kcnq3Q8K3F6 873 aa28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Usp42B2RQC2 1324 aaKnown RBP28.75■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Tmem67Q8BR76 992 aa28.74■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Psma5Q9Z2U1 241 aaKnown RBP28.74■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Usp48Q3V0C5 1052 aa28.74■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Mre11Q61216 706 aa28.74■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Bms1Q6PGF5 1284 aaKnown RBP28.74■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Akap2O54931 893 aa28.73■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Tom1l2Q5SRX1 507 aa28.73■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Spon1Q8VCC9 807 aa28.73■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Pla2g12bQ99P27 195 aa28.73■■■□□ 2.19
Pcf11-205ENSMUST00000208255 NesQ6P5H2 1864 aaKnown RBP28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Dhx16G3X8X0 1044 aaKnown RBP28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Esyt2Q3TZZ7 845 aa28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Tbc1d7Q9D0K0 293 aa28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Q9D9S1 216 aa28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Smarce1O54941 411 aaKnown RBP28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 KinQ8K339 391 aa28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Epb41l3Q9WV92 929 aa28.72■■■□□ 2.19
Pcf11-205ENSMUST00000208255 CrcpO35427 148 aa28.71■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Spata18Q0P557 537 aa28.71■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Rps6kb1Q8BSK8 525 aa28.71■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Ces1dQ8VCT4 565 aa28.71■■■□□ 2.19
Pcf11-205ENSMUST00000208255 1700006A11RikB9EHI3 544 aa28.7■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Tmed8Q3UHI4 326 aa28.7■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Slc10a5Q5PT54 434 aa28.7■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Rufy3Q9D394 469 aa28.7■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Stk32bQ9JJX8 414 aa28.7■■■□□ 2.19
Pcf11-205ENSMUST00000208255 Adgra3Q7TT36 1310 aa28.7■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Irgm2A0A140LIF8 407 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Rps12P63323 132 aaKnown RBP28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Rassf8Q8CJ96 419 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Hdac9Q99N13 588 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Pold4Q9CWP8 107 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 1700018B08RikQ9DA83 213 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Pnpla6Q3TRM4 1355 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Myh2G3UW82 1942 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Gnat2P50149 354 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Pkp1P97350 728 aaKnown RBP28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Rbm43Q99J64 343 aa28.69■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Zfp646Q6NV66 1788 aa28.68■■■□□ 2.18
Pcf11-205ENSMUST00000208255 Pet2A2AHY8 747 aa28.68■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms