RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Znf219Q6IQX8 726 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Atg4aQ8C9S8 396 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Vps37cQ8R105 352 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Fam76aQ922G2 307 aa12.5□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Eif2ak4Q9QZ05 1648 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 MthfslL7N466 203 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Gse1Q3U3C9 1213 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Usp37Q8C0R0 979 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Cep152A2AUM9 1736 aaKnown RBP12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Tcp11l1Q8BTG3 509 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Syce1Q9D495 329 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Noc2lQ9WV70 747 aaKnown RBP12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Kdm6aO70546 1401 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Card10P58660 1021 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Yeats4Q9CR11 227 aaKnown RBP12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 DesP31001 469 aaKnown RBP12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 SlmapQ3URD3 845 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Jade3Q6IE82 823 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ubac1Q8VDI7 409 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 TchpQ3TVW5 497 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Adgrl3Q80TS3 1537 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Asic3Q6X1Y6 530 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ppp6r3Q922D4 844 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Cep19Q9CQA8 163 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Smc1aQ9CU62 1233 aaKnown RBP12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Appbp2Q9DAX9 585 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Rlbp1Q9Z275 317 aa12.49□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Gm28919A0A087WP35 240 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 TrdnE9Q9K5 693 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ctage5Q8R311 779 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Polr2dQ9D7M8 142 aaKnown RBP12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Samd15F6XZJ7 620 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Psmb7P70195 277 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Kcna6Q61923 529 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Specc1Q5SXY1 1067 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Pcdhb22Q91XZ8 794 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ccnt1Q9QWV9 724 aaKnown RBP12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Adgrl1Q80TR1 1466 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Tldc2A2ACG1 198 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Kdm1aQ6ZQ88 853 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Tmx3Q8BXZ1 456 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Stox1B2RQL2 990 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 CalrP14211 416 aaKnown RBP12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Lrrc36Q3V0M2 755 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Asic4Q7TNS7 539 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Mettl5Q8K1A0 209 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ttc14Q9CSP9 761 aa12.48□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Abcb4P21440 1276 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Atp2b4Q6Q477 1205 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 4921504E06RikQ8CET2 560 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Scaf11E9PZM7 1456 aaKnown RBP12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Eif4a1P60843 406 aaKnown RBP12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Hexim1Q8R409 356 aaKnown RBP12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 BbxQ8VBW5 907 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 HelbQ6NVF4 1074 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Csrnp2Q8BGQ2 534 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Sec62Q8BU14 398 aaKnown RBP12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Fhod3Q76LL6 1578 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Zfp213E9QAW0 468 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Nf2P46662 596 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 FanccP50652 591 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Dok7Q18PE0 504 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Rapgef1Q3UHC1 1224 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Hook2Q7TMK6 716 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Bicd1Q8BR07 835 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Abcc4E9Q236 1325 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Zkscan4Q5SZT6 480 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 IqcgQ80W32 419 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Hip1rQ9JKY5 1068 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Cnpy2Q9QXT0 182 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 1700029H14RikE9PY36 240 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Clcn1Q64347 994 aa12.47□□□□□ -0.41
Scn8a-203ENSMUST00000108908 MaeaQ4VC33 396 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Nlrp9aQ66X03 949 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ccdc113Q8C5T8 377 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Arpp21Q9DCB4 807 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Azi2Q9QYP6 405 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Atp12aQ9Z1W8 1035 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Ublcp1Q8BGR9 318 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Depdc1bQ8BH88 529 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Tpx2A2APB8 745 aaKnown RBP12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 NppbP40753 121 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Setdb1O88974 1307 aa12.46□□□□□ -0.41
Scn8a-203ENSMUST00000108908 Gm28047Q3US59 414 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gm16486A0A1D5RMD1 1434 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Rasal2E9PW37 1286 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gm5624F6ZZG8 207 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Sik1Q60670 779 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tex19.1Q99MV2 351 aa12.46□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ube3aO08759 870 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Cyp24a1Q64441 514 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Paip2Q9D6V8 124 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Top1Q04750 767 aaKnown RBP12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 VrtnQ3SYK4 740 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Lrsam1Q80ZI6 727 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ifih1Q8R5F7 1025 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tex14Q7M6U3 1450 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Dzip1lQ499E4 774 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ccdc25Q78PG9 208 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Usp33Q8R5K2 909 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms