RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm43638A0A0J9YU36 694 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gm28047Q3US59 414 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Ggt6Q6PDE7 497 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Tpcn2Q8BWC0 731 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 MbipQ99LQ1 341 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Vps33aQ9D2N9 598 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 BcorQ8CGN4 1759 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Pald1P70261 859 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Mns1Q61884 491 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Tmem266Q8BZB3 538 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Lrrc59Q922Q8 307 aaKnown RBP13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Emilin1Q99K41 1017 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Robo1O89026 1612 aa13.35□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gpr182P43142 395 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Creld2Q9CYA0 350 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Thsd7aQ69ZU6 1645 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Plekhd1B2RPU2 505 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 HdgfP51859 237 aaKnown RBP13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gm12185Q5NCB2 835 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Pram1Q6BCL1 675 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Gimap5Q8BWF2 308 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Yeats4Q9CR11 227 aaKnown RBP13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Rgs12Q8CGE9 1381 aa13.34□□□□□ -0.27
Col9a1-202ENSMUST00000088349 AK157302I3ITR1 129 aa13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Metap2O08663 478 aaKnown RBP13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Llgl2Q3TJ91 1027 aa13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Kri1Q8VDQ9 704 aaKnown RBP13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Isca1Q9D924 129 aa13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Telo2Q9DC40 840 aaKnown RBP13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Vnn1Q9Z0K8 512 aa13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Npc1l1Q6T3U4 1333 aa13.33□□□□□ -0.27
Col9a1-202ENSMUST00000088349 Lcmt1A0A0U1RNF2 332 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Prl3d2F6R3P9 224 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Lipo1J3QME6 396 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cyp26a1O55127 497 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 GmnnO88513 206 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cdc37Q61081 379 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ddx60E9PZQ1 1711 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gm20425E9Q035 978 aaKnown RBP13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 NefhP19246 1090 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 SrprbP47758 269 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Usp13Q5BKP2 858 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cyp7a1Q64505 503 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Fam102bQ8BQS4 339 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Tmem87aQ8BXN9 555 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 ImmtQ8CAQ8 757 aaKnown RBP13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Lmtk3Q5XJV6 1424 aa13.33□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Dapk3O54784 448 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Znf326O88291 580 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ftl2P49945 183 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Q66JV7 365 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ulbp1Q8HWA3 334 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Abl1P00520 1123 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Eif5P59325 429 aaKnown RBP13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ankrd40Q5SUE8 363 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Bag1Q60739 355 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Morc2aQ69ZX6 1030 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Etf1Q8BWY3 437 aaKnown RBP13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Trim52Q8CDV4 233 aa13.32□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ugt1a6bK9J7B2 531 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ccng2O08918 344 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Kmt5bQ3U8K7 883 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ugt1a6Q64435 531 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Trak2Q6P9N8 913 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Pcdhb14Q6PB90 796 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ugt1a7cQ6ZQM8 531 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Miga2Q8BK03 593 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Klhl30Q8C3F7 581 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Zbtb1Q91VL9 713 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Fam76aQ922G2 307 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Dctn1O08788 1281 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gng11P61953 73 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Pla2g4fQ50L41 855 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ankrd1Q9CR42 319 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Desi2Q9D291 194 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ktn1Q61595 1327 aaKnown RBP13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cdc27A2A6Q5 825 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Pde4bB1AWC9 736 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cyp3a57D3YYZ0 503 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 TsksO54887 585 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cyp19a1P28649 503 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gabpb2P81069 414 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Krt39Q6IFX4 482 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ssfa2Q922B9 1252 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Lonp2Q9DBN5 852 aa13.31□□□□□ -0.28
Col9a1-202ENSMUST00000088349 PnnO35691 725 aaKnown RBP13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gtf2f1Q3THK3 508 aaKnown RBP13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Dpf2Q61103 391 aaKnown RBP13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ctdspl2Q8BG15 465 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Prkag3Q8BGM7 489 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Map10Q8BJS7 891 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Maats1Q8BRC6 783 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Mtmr6Q8VE11 617 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Zbtb43Q9DAI4 467 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Appbp2Q9DAX9 585 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 ChmQ9QXG2 665 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Brwd3A2AHJ4 1799 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 AW822073A0A0N4SUK1 652 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ess2O70279 479 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Epha2Q03145 977 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms