RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ankfy1Q810B6 1169 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Micall1Q8BGT6 870 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 FibpQ9JI19 357 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Actn2Q9JI91 894 aa17.53■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Lig3P97386 1015 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Kdm1aQ6ZQ88 853 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Rapgef3Q8VCC8 918 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccdc70Q9D9B0 223 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 GfapP03995 430 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Lmod1Q8BVA4 595 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 PalmdQ9JHU2 551 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Gm2030D3Z7C4 212 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Trpc3Q9QZC1 836 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccdc162pQ0VG85 912 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Wdr70Q3TWF6 657 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Ccpg1Q640L3 753 aa17.52■□□□□ 0.4
Ubr3-201ENSMUST00000055758 Sh3gl3Q62421 347 aa17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Nsfl1cQ9CZ44 370 aaKnown RBP17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Clasp2Q8BRT1 1286 aaKnown RBP17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Izumo3A6PWV3 263 aa17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Taok1Q5F2E8 1001 aa17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Krt25Q8VCW2 446 aa17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Sec63Q8VHE0 760 aaKnown RBP17.52■□□□□ 0.39
Ubr3-201ENSMUST00000055758 ParvgQ9ERD8 331 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Top2aQ01320 1528 aaKnown RBP17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 CltaO08585 235 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Slc4a8Q8JZR6 1089 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Sox13Q04891 613 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 SpopQ6ZWS8 374 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Smarca2Q6DIC0 1577 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 AatfQ9JKX4 526 aaKnown RBP17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 1700018F24RikB2RW27 314 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Terf2ipQ91VL8 393 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Krt71Q9R0H5 524 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Lrriq3Q14DL3 633 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ubash3aQ3V3E1 624 aa17.51■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Nup62clA2AG10 272 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Krt19P19001 403 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Cnnm2Q3TWN3 875 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ttc4Q8R3H9 386 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Mctp2Q5RJH2 878 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ccdc157Q5SPX1 718 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Exoc3Q6KAR6 755 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Zranb1Q7M760 708 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Elp1Q7TT37 1333 aaKnown RBP17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Afap1Q80YS6 731 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gm5624F6ZZG8 207 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 SsbP32067 415 aaKnown RBP17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ice2Q3UZ18 988 aaKnown RBP17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Clcn1Q64347 994 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Spc24Q9D083 201 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 KaznQ69ZS8 779 aa17.5■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Becn2P0DM65 447 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gimap8Q75N62 688 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gm5934D3Z4U6 212 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gm6583E9Q8Z1 469 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Klhl7Q8BUL5 586 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ttc5Q99LG4 440 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Traf1P39428 409 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Slf2Q6P9P0 1278 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ift81O35594 676 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gm5935Q497S0 212 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ncf1Q09014 390 aa17.49■□□□□ 0.39
Ubr3-201ENSMUST00000055758 PhexP70669 749 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Vat1lQ80TB8 417 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Plcd1Q8R3B1 756 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Mx2Q9WVP9 655 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Evi5P97366 809 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Cnga4Q3UW12 575 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Gm28043E0CXC2 719 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Heatr4E9Q357 955 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Eef1bO70251 225 aaKnown RBP17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 P4ha1Q60715 534 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Pdzrn3Q69ZS0 1063 aa17.48■□□□□ 0.39
Ubr3-201ENSMUST00000055758 GabpaQ00422 454 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Igflr1Q3U4N7 345 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ccdc13D3YV10 709 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ccdc175E9PVB3 822 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ercc5P35689 1170 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 MycbpapQ5SUV2 932 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Prpf40bQ80W14 870 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 DgkiD3YWQ0 1071 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Zfp651E9PZ11 729 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Pabpn1Q8CCS6 302 aaKnown RBP17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Cabp5Q9JLK3 173 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 AU022751B1B0V2 589 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Lekr1B2RVN1 116 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Pdrg1P59048 133 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 EnahQ03173 802 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 P2rx5Q3UYI1 455 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Serpinb13Q8CDC0 389 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Arhgef6Q8K4I3 771 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Lrrc2Q8VDB8 371 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Arap1Q4LDD4 1452 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Krt13P08730 437 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Tpd52Q62393 224 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Anp32cQ64G17 123 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Pih1h3bQ8C6P5 218 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Drc3Q9D5E4 523 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Plekho1Q9JIY0 408 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms