RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Trim59Q922Y2 403 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Atp1a4Q9WV27 1032 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Kcnh3Q9WVJ0 1095 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Wdr17E9Q271 1322 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ubr1O70481 1757 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Atp10bB1AWN4 1474 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Lcmt1A0A0U1RNF2 332 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Gm5624F6ZZG8 207 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Exosc10P56960 887 aaKnown RBP11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Kmt5bQ3U8K7 883 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Bcl11bQ99PV8 884 aa11.87□□□□□ -0.51
Trim17-201ENSMUST00000047697 Hap1O35668 628 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 CebpaP53566 359 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Specc1lQ2KN98 1118 aaKnown RBP11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Luc7l2Q7TNC4 392 aaKnown RBP11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Smc2Q8CG48 1191 aaKnown RBP11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Rgs12Q8CGE9 1381 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Slit2Q9R1B9 1521 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ccdc191J3QQ27 883 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Rtel1Q0VGM9 1203 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ccdc34Q3UI66 367 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Pex1Q5BL07 1284 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Cdc37Q61081 379 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Zbtb40Q6PCS8 1258 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ppp2r2cQ8BG02 447 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Tubgcp2Q921G8 905 aa11.86□□□□□ -0.51
Trim17-201ENSMUST00000047697 Gm20425E9Q035 978 aaKnown RBP11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Cyp26a1O55127 497 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 SrprbP47758 269 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Grin2dQ03391 1323 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Smg7Q5RJH6 1138 aaKnown RBP11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Krt39Q6IFX4 482 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 CerkQ8K4Q7 531 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Fam213aQ9CYH2 218 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Polr2dQ9D7M8 142 aaKnown RBP11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Cyp2d34L7N463 504 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 NapbP28663 298 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Tab2Q99K90 693 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 DonsonQ9QXP4 560 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ovgp1Q62010 721 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Kcnj14Q8JZN3 434 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 Farp2Q91VS8 1065 aa11.85□□□□□ -0.51
Trim17-201ENSMUST00000047697 EmbP21995 330 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Jakmip3Q5DTN8 844 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 9230110C19RikQ8CC70 267 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ulbp1Q8HWA3 334 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Appbp2Q9DAX9 585 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Pik3ap1Q9EQ32 811 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ess2O70279 479 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Cep112Q5PR68 954 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ctdspl2Q8BG15 465 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Clic6Q8BHB9 596 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Nek9Q8K1R7 984 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 AatfQ9JKX4 526 aaKnown RBP11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Mkrn3Q60764 544 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ncoa7Q6DFV7 943 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Zkscan8Q8BSL0 588 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 MbipQ99LQ1 341 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ahnak2E9PYB0 1738 aaKnown RBP11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Map2P20357 1828 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Col16a1Q8BLX7 1580 aa11.84□□□□□ -0.51
Trim17-201ENSMUST00000047697 Npc1l1Q6T3U4 1333 aa11.83□□□□□ -0.51
Trim17-201ENSMUST00000047697 Prl3d2F6R3P9 224 aa11.83□□□□□ -0.51
Trim17-201ENSMUST00000047697 Lipo1J3QME6 396 aa11.83□□□□□ -0.51
Trim17-201ENSMUST00000047697 VeztQ3ZK22 780 aa11.83□□□□□ -0.51
Trim17-201ENSMUST00000047697 Acap3Q6NXL5 833 aa11.83□□□□□ -0.51
Trim17-201ENSMUST00000047697 Ugt1a6bK9J7B2 531 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 TsksO54887 585 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Myo1bP46735 1107 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ugt1a6Q64435 531 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ugt1a7cQ6ZQM8 531 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Asap2Q7SIG6 958 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 IqcgQ80W32 419 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Q8CEZ4 452 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Gtf3c5Q8R2T8 520 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Smc1aQ9CU62 1233 aaKnown RBP11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Tubb4aQ9D6F9 444 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Telo2Q9DC40 840 aaKnown RBP11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Sos2Q02384 1333 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 TbcaP48428 108 aaKnown RBP11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Pla2g4fQ50L41 855 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Smc1bQ920F6 1248 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Chaf1aQ9QWF0 911 aa11.83□□□□□ -0.52
Trim17-201ENSMUST00000047697 Atf3Q60765 181 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Atg9aQ68FE2 551 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Tcp11l1Q8BTG3 509 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ppp4r3bQ922R5 820 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Cwc15Q9JHS9 229 aaKnown RBP11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Pik3c2aQ61194 1686 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ccdc57Q6PHN1 1016 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ctdp1Q7TSG2 960 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Fam160b2Q80YR2 744 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Tmem87aQ8BXN9 555 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Zscan20B2KFW1 1030 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Pald1P70261 859 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Bola3Q8CEI1 110 aa11.82□□□□□ -0.52
Trim17-201ENSMUST00000047697 Mctp2Q5RJH2 878 aa11.81□□□□□ -0.52
Trim17-201ENSMUST00000047697 Gnl3lQ6PGG6 577 aaKnown RBP11.81□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ptpn23Q6PB44 1692 aa11.81□□□□□ -0.52
Trim17-201ENSMUST00000047697 Ampd3O08739 766 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms