RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
SRRT-219ENST00000641476 SSBP2P81877 361 aaPredicted RBP11.25□□□□□ -0.61
SRRT-219ENST00000641476 IGSF11Q5DX21 431 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
SRRT-219ENST00000641476 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 SLA2Q9H6Q3 261 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
SRRT-219ENST00000641476 A0A0B4J203 849 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 IFITM5A6NNB3 132 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 PDCD5O14737 125 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 DIRAS3O95661 229 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 IGLV2-23P01705 113 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 TRGV3P03979 118 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 OR8U9P0C7N5 309 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 SPNP16150 400 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
SRRT-219ENST00000641476 GNB3P16520 340 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 MYL9P24844 172 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 SDC2P34741 201 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 PITPNAQ00169 270 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 FXYD3Q14802 87 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 ACSM6Q6P461 480 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
SRRT-219ENST00000641476 POC5Q8NA72 575 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 OR6Q1Q8NGQ2 317 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 OR10R2Q8NGX6 335 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 HARBI1Q96MB7 349 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 SDHAF2Q9NX18 166 aa11.24□□□□□ -0.61
SRRT-219ENST00000641476 A0A075B6Q4 140 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 SMIM30A4D0T7 59 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 RAB27BO00194 218 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 GABARAPO95166 117 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 HSPB1P04792 205 aaKnown RBP11.23□□□□□ -0.61
SRRT-219ENST00000641476 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 GSTT2BP0CG30 244 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 GP9P14770 177 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 RAB3BP20337 219 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 RAB6AP20340 208 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 CD40LGP29965 261 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 VBP1P61758 197 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 NCS1P62166 190 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 CTF1Q16619 201 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 OR10J5Q8NHC4 309 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 RHOVQ96L33 236 aa11.23□□□□□ -0.61
SRRT-219ENST00000641476 ZNF230Q9UIE0 474 aaPredicted RBP11.23□□□□□ -0.61
SRRT-219ENST00000641476 H3BUA1 57 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 MXD1Q05195 221 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 OVCH2Q7RTZ1 564 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 HAPLN4Q86UW8 402 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 HYDINQ4G0P3 5121 aa11.22□□□□□ -0.61
SRRT-219ENST00000641476 CNIH1O95406 144 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 CRYGBP07316 175 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 DEFA5Q01523 94 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 CBX3Q13185 183 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 RTL8BQ17RB0 113 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 TMEM177Q53S58 311 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 TPRA1Q86W33 373 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 CITED4Q96RK1 184 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 CEPT1Q9Y6K0 416 aa11.21□□□□□ -0.61
SRRT-219ENST00000641476 CSMD3Q7Z407 3707 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 SHOXO15266 292 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
SRRT-219ENST00000641476 LGALS7P47929 136 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 ARFRP1Q13795 201 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 Q6ZS49 121 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 H1FOOQ8IZA3 346 aaPredicted RBP11.2□□□□□ -0.62
SRRT-219ENST00000641476 BVESQ8NE79 360 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 DDB2Q92466 427 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
SRRT-219ENST00000641476 RBM38Q9H0Z9 239 aaKnown RBP11.2□□□□□ -0.62
SRRT-219ENST00000641476 RBM7Q9Y580 266 aaKnown RBP11.2□□□□□ -0.62
SRRT-219ENST00000641476 METTL21EPA6NDL7 271 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 SRRM4A7MD48 611 aaKnown RBP11.19□□□□□ -0.62
SRRT-219ENST00000641476 NOTOA8MTQ0 251 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 CRYZL1O95825 349 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 FRMD6-AS1P0C7T7 363 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 ZP3P21754 424 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 TALDO1P37837 337 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 TMBIM6P55061 237 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
SRRT-219ENST00000641476 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRRT-219ENST00000641476 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 RAB2BQ8WUD1 216 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 ISOC1Q96CN7 298 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 RSRP1Q9BUV0 290 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
SRRT-219ENST00000641476 RANGRFQ9HD47 186 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms