RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SHISA3A0PJX4 238 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 SMIM30A4D0T7 59 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 SRRM4A7MD48 611 aaKnown RBP12.74□□□□□ -0.37
PHGDH-213ENST00000641272 J3QRK9 145 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 MFNGO00587 321 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 PSMA1P25786 263 aaKnown RBP12.74□□□□□ -0.37
PHGDH-213ENST00000641272 LGALS7P47929 136 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 SERPINB10P48595 397 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 TAGLNQ01995 201 aaKnown RBP12.74□□□□□ -0.37
PHGDH-213ENST00000641272 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 ISOC1Q96CN7 298 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 MGLLQ99685 303 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 DUSP21Q9H596 190 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 RETNQ9HD89 108 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 C19orf73Q9NVV2 129 aa12.74□□□□□ -0.37
PHGDH-213ENST00000641272 IGKV1D-8A0A087WSZ0 117 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 IZUMO1RA6ND01 250 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 MPPED1O15442 326 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 CRYZL1O95825 349 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 PRH1P02810 166 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 KLF5Q13887 457 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-213ENST00000641272 MRGPRG-AS1Q2M3A8 158 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 TMEM177Q53S58 311 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 C10orf55Q5SWW7 151 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 IL34Q6ZMJ4 242 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 OR10R2Q8NGX6 335 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
PHGDH-213ENST00000641272 PEF1Q9UBV8 284 aaKnown RBP12.73□□□□□ -0.37
PHGDH-213ENST00000641272 ELF5Q9UKW6 265 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-213ENST00000641272 RAB22AQ9UL26 194 aa12.73□□□□□ -0.37
PHGDH-213ENST00000641272 LINC00473A8K010 186 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
PHGDH-213ENST00000641272 GADD45AP24522 165 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
PHGDH-213ENST00000641272 SSX1Q16384 188 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 VMA21Q3ZAQ7 101 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 OR2B11Q5JQS5 317 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 ZNF343Q6P1L6 599 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 EDA2RQ9HAV5 297 aa12.72□□□□□ -0.37
PHGDH-213ENST00000641272 LCE6AA0A183 80 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 MSGN1A6NI15 193 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 CSN3P07498 182 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 AADACP22760 399 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 CRHBPP24387 322 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 ARFRP1Q13795 201 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 PRSS8Q16651 343 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 ADAD2Q8NCV1 583 aaKnown RBP12.71□□□□□ -0.37
PHGDH-213ENST00000641272 SPATA25Q9BR10 227 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 ACOT13Q9NPJ3 140 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 TNCP24821 2201 aa12.71□□□□□ -0.37
PHGDH-213ENST00000641272 H0Y980 276 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 RAB27BO00194 218 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 OR9G9P0C7N8 305 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 SAA1P0DJI8 122 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-213ENST00000641272 MYL9P24844 172 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
PHGDH-213ENST00000641272 TALDO1P37837 337 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 UBE2KP61086 200 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 RHOGP84095 191 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 ZNF45Q02386 682 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 HAGHQ16775 308 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 LCN12Q6JVE5 192 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 ZNF367Q7RTV3 350 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 GTSCR1Q86UQ5 136 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-213ENST00000641272 DDB2Q92466 427 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 LYSTQ99698 3801 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
PHGDH-213ENST00000641272 EPPK1P58107 5090 aaKnown RBP12.69□□□□□ -0.38
PHGDH-213ENST00000641272 CSMD3Q7Z407 3707 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 IFITM5A6NNB3 132 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 A8MZ25 164 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 BMPR1BO00238 502 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 PDCD5O14737 125 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 RRASP10301 218 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 EDN2P20800 178 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 TBCEQ15813 527 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-213ENST00000641272 CNBD2Q96M20 576 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 TMEM68Q96MH6 324 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-213ENST00000641272 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 TUBA4BQ9H853 241 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 ZNF430Q9H8G1 570 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-213ENST00000641272 SELENOKQ9Y6D0 94 aa12.69□□□□□ -0.38
PHGDH-213ENST00000641272 FCGR3BO75015 233 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 OR2A4O95047 310 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 KCTD9Q7L273 389 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 NR2C2APQ86WQ0 139 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 Q8N402 240 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms