RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ANAPC16Q96DE5 110 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 C12orf77C9JDV5 145 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 HOXA6P31267 233 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CEACAM3P40198 252 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 RTN4RL2Q86UN3 420 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 PRR7Q8TB68 274 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CCL21O00585 134 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CSN3P07498 182 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 CECR9P0C854 216 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
SCARB2-216ENST00000639300 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 PDE6DO43924 150 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-216ENST00000639300 MMDQ15546 238 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 HCP5Q6MZN7 132 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 HELZP42694 1942 aaKnown RBP12.26□□□□□ -0.45
SCARB2-216ENST00000639300 FCER1GP30273 86 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 HEXA-AS1Q9H8Q6 139 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 IGKV1D-13A0A0B4J2D9 117 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 GNG7O60262 68 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 SMIM6P0DI80 62 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 IGKV1-13P0DP09 117 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 UCP1P25874 307 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 PTGDSP41222 190 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 LPAR2Q9HBW0 351 aa12.26□□□□□ -0.45
SCARB2-216ENST00000639300 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 OR4A8P0C604 315 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 LHX2P50458 406 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 TNFSF10P50591 281 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF714Q96N38 554 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 THYN1Q9P016 225 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 IGKV1-12A0A0C4DH73 117 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 WISP1O95388 367 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 IGKV1D-12P01611 117 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 ASCL3Q9NQ33 180 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 CLDN18P56856 261 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 FA2HQ7L5A8 372 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
SCARB2-216ENST00000639300 S100A4P26447 101 aaKnown RBP12.24□□□□□ -0.45
SCARB2-216ENST00000639300 FAM27E3Q08E93 113 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 OR8B3Q8NGG8 313 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 OR8B2Q96RD0 313 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 TCF19Q9Y242 345 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 CENPFP49454 3210 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 SMPD2O60906 423 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 CCL1P22362 96 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 CTSSP25774 331 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 HTR1DP28221 377 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF343Q6P1L6 599 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 AMMECR1Q9Y4X0 333 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-216ENST00000639300 PLXND1Q9Y4D7 1925 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 LRRC3CA6NJW4 275 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 NEURL1O76050 574 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 G0S2P27469 103 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
SCARB2-216ENST00000639300 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
SCARB2-216ENST00000639300 ELOA3CA0A087WX78 387 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 A0A087X0M5 115 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 A0A1B0GX30 115 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 FAM162BQ5T6X4 162 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 BIVMQ86UB2 503 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 KLHDC1Q8N7A1 406 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 LSM10Q969L4 123 aaKnown RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 HIST1H2BAQ96A08 127 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF883P0CG24 379 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 COL8A1P27658 744 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 ABLIM2Q6H8Q1 611 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 OR8I2Q8N0Y5 310 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 C11orf42Q8N5U0 333 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 TCTEX1D1Q8N7M0 179 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 HILPDAQ9Y5L2 63 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 FAM90A26D6RGX4 464 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 SLC25A17O43808 307 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 PTBP3O95758 552 aaKnown RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 TFF1P04155 84 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 FAM166AQ6J272 317 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 GPR61Q9BZJ8 451 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 CDX4O14627 284 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 USF1P22415 310 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-216ENST00000639300 IGHV1-2P23083 117 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 OR1L6Q8NGR2 347 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms