RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 IGHV3-11P01762 117 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 HSPB1P04792 205 aaKnown RBP14.68□□□□□ -0.06
CLN6-221ENST00000637494 SNRPBP14678 240 aaKnown RBP14.68□□□□□ -0.06
CLN6-221ENST00000637494 MXD1Q05195 221 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 ASPHD1Q5U4P2 390 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 POC5Q8NA72 575 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 PHB2Q99623 299 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 OR51E2Q9H255 320 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 LOC100506127A0A0U1RQW1 187 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 CREBL2O60519 120 aaPredicted RBP14.67□□□□□ -0.06
CLN6-221ENST00000637494 IGLV2-23P01705 113 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 CD36P16671 472 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 DUTP33316 252 aaKnown RBP14.67□□□□□ -0.06
CLN6-221ENST00000637494 SDC2P34741 201 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 SLURP1P55000 103 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 SCAND1P57086 179 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 ZNF645Q8N7E2 425 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 LGALS14Q8TCE9 139 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 NUDCD2Q8WVJ2 157 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 DLX4Q92988 240 aaPredicted RBP14.67□□□□□ -0.06
CLN6-221ENST00000637494 RHBDL2Q9NX52 303 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 ELF5Q9UKW6 265 aaPredicted RBP14.67□□□□□ -0.06
CLN6-221ENST00000637494 PRELID3BQ9Y3B1 194 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 OR2W1Q9Y3N9 320 aa14.67□□□□□ -0.06
CLN6-221ENST00000637494 IGHV4OR15-8A0A075B7B6 117 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 A0A087WW49 117 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 TMEM235A6NFC5 223 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 J3QRK9 145 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 CRYZL1O95825 349 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 NHLRC4P0CG21 123 aaPredicted RBP14.66□□□□□ -0.06
CLN6-221ENST00000637494 NEDD8Q15843 81 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 CNIH2Q6PI25 160 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 TEX45Q8NA69 505 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 OR5T1Q8NG75 326 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 OSR1Q8TAX0 266 aaPredicted RBP14.66□□□□□ -0.06
CLN6-221ENST00000637494 RHOVQ96L33 236 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 DCUN1D5Q9BTE7 237 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 ELOVL1Q9BW60 279 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
CLN6-221ENST00000637494 ETV7Q9Y603 341 aa14.66□□□□□ -0.06
CLN6-221ENST00000637494 IGKV1D-8A0A087WSZ0 117 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 ACTL6BO94805 426 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 CRYGBP07316 175 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 UBE2KP61086 200 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 PJVKQ0ZLH3 352 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 TIMM50Q3ZCQ8 353 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 IDNKQ5T6J7 187 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 OR6Q1Q8NGQ2 317 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 C5orf30Q96GV9 206 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 OR4C12Q96R67 309 aa14.65□□□□□ -0.06
CLN6-221ENST00000637494 RANGRFQ9HD47 186 aaPredicted RBP14.65□□□□□ -0.06
CLN6-221ENST00000637494 MPPED1O15442 326 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 TUSC2O75896 110 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 ZP3P21754 424 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 AADACP22760 399 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 NFYAP23511 347 aaPredicted RBP14.64□□□□□ -0.07
CLN6-221ENST00000637494 ARPC4P59998 168 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 TNXAQ16473 311 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 KCTD21Q4G0X4 260 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 C11orf87Q6NUJ2 197 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 KCTD9Q7L273 389 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 ACOT12Q8WYK0 555 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 DDB2Q92466 427 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 VCX3AQ9NNX9 186 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 DIABLOQ9NR28 239 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 COA4Q9NYJ1 87 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 ANXA10Q9UJ72 324 aa14.64□□□□□ -0.07
CLN6-221ENST00000637494 LSM4Q9Y4Z0 139 aaKnown RBP14.64□□□□□ -0.07
CLN6-221ENST00000637494 LINC00473A8K010 186 aa14.63□□□□□ -0.07
CLN6-221ENST00000637494 TMEM127O75204 238 aa14.63□□□□□ -0.07
CLN6-221ENST00000637494 HLA-DQB1P01920 261 aa14.63□□□□□ -0.07
CLN6-221ENST00000637494 ACSM6Q6P461 480 aa14.63□□□□□ -0.07
CLN6-221ENST00000637494 DNAH3Q8TD57 4116 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 TRAV18A0A075B6X5 111 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 A0A0A6YYH2 397 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 A6NJ64 397 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 SRRM4A7MD48 611 aaKnown RBP14.62□□□□□ -0.07
CLN6-221ENST00000637494 FCGR3BO75015 233 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 CLEC2LP0C7M8 214 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 PRSS8Q16651 343 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 CROCCP3Q8IVE0 287 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 HSD17B10Q99714 261 aaKnown RBP14.62□□□□□ -0.07
CLN6-221ENST00000637494 RBMX2Q9Y388 322 aaKnown RBP14.62□□□□□ -0.07
CLN6-221ENST00000637494 SMAD5-AS1Q9Y6J3 95 aa14.62□□□□□ -0.07
CLN6-221ENST00000637494 MSGN1A6NI15 193 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 BRI3O95415 125 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 CDK10Q15131 360 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 MMD2Q8IY49 270 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 BEST4Q8NFU0 473 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 TCTEX1D2Q8WW35 142 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 USMG5Q96IX5 58 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 TINAGL1Q9GZM7 467 aaPredicted RBP14.61□□□□□ -0.07
CLN6-221ENST00000637494 RNF167Q9H6Y7 350 aa14.61□□□□□ -0.07
CLN6-221ENST00000637494 ANKRD34BA5PLL1 514 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 SSX5O60225 188 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 SSBP2P81877 361 aaPredicted RBP14.6□□□□□ -0.07
CLN6-221ENST00000637494 TATDN3Q17R31 274 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 IDO2Q6ZQW0 420 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 OR5H6Q8NGV6 325 aa14.6□□□□□ -0.07
CLN6-221ENST00000637494 OR4S2Q8NH73 311 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms