RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MAFIPQ8WZ33 124 aa14.11□□□□□ -0.15
CLN6-220ENST00000637450 ZNF230Q9UIE0 474 aaPredicted RBP14.11□□□□□ -0.15
CLN6-220ENST00000637450 CSMD3Q7Z407 3707 aa14.11□□□□□ -0.15
CLN6-220ENST00000637450 SHISA3A0PJX4 238 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 RAB27BO00194 218 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 MFNGO00587 321 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 PDCD5O14737 125 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 SHOXO15266 292 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 RRASP10301 218 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 LYL1P12980 280 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 AADACP22760 399 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 GADD45AP24522 165 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 CBX3Q13185 183 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 RTL8BQ17RB0 113 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 ZNF343Q6P1L6 599 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 OR9G4Q8NGQ1 327 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 CITED4Q96RK1 184 aa14.1□□□□□ -0.15
CLN6-220ENST00000637450 PEF1Q9UBV8 284 aaKnown RBP14.1□□□□□ -0.15
CLN6-220ENST00000637450 ERICH4A6NGS2 130 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 MSGN1A6NI15 193 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 IFITM5A6NNB3 132 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 HIST1H1DP16402 221 aaKnown RBP14.09□□□□□ -0.15
CLN6-220ENST00000637450 RAB6AP20340 208 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 SYNJ2BPP57105 145 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 OR10A3P58181 314 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 DYRK1AQ13627 763 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 SSX1Q16384 188 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 SGPP2Q8IWX5 399 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 TEX45Q8NA69 505 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 DDB2Q92466 427 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 CENPOQ9BU64 300 aa14.09□□□□□ -0.15
CLN6-220ENST00000637450 RBM7Q9Y580 266 aaKnown RBP14.09□□□□□ -0.15
CLN6-220ENST00000637450 A0A075B6Q4 140 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 H0Y980 276 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 DUTP33316 252 aaKnown RBP14.08□□□□□ -0.16
CLN6-220ENST00000637450 UBE2KP61086 200 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 DEFA5Q01523 94 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 TBCEQ15813 527 aaPredicted RBP14.08□□□□□ -0.16
CLN6-220ENST00000637450 PRSS8Q16651 343 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 Q6ZS49 121 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 H1FOOQ8IZA3 346 aaPredicted RBP14.08□□□□□ -0.16
CLN6-220ENST00000637450 ADTRPQ96IZ2 230 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 GINS4Q9BRT9 223 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 COA4Q9NYJ1 87 aa14.08□□□□□ -0.16
CLN6-220ENST00000637450 METTL21EPA6NDL7 271 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 LINC00473A8K010 186 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
CLN6-220ENST00000637450 TRBV12-3P01733 135 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 CSN3P07498 182 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 VMA21Q3ZAQ7 101 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 ZNF367Q7RTV3 350 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 ADAD2Q8NCV1 583 aaKnown RBP14.07□□□□□ -0.16
CLN6-220ENST00000637450 PHB2Q99623 299 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 SIGLEC8Q9NYZ4 499 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
CLN6-220ENST00000637450 IGKV1D-8A0A087WSZ0 117 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 A0A0B4J203 849 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 TRDV1A0A1B0GX56 115 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 APELAP0DMC3 54 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 RAB3BP20337 219 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 TALDO1P37837 337 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 ARFRP1Q13795 201 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 TNXAQ16473 311 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 TATDN3Q17R31 274 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 THAP7Q9BT49 309 aaPredicted RBP14.06□□□□□ -0.16
CLN6-220ENST00000637450 NDUFB11Q9NX14 153 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
CLN6-220ENST00000637450 CRYZL1O95825 349 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 OR9G9P0C7N8 305 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 MYL9P24844 172 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 RPEL1Q2QD12 228 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 IDO2Q6ZQW0 420 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 OSR1Q8TAX0 266 aaPredicted RBP14.05□□□□□ -0.16
CLN6-220ENST00000637450 SRSF12Q8WXF0 261 aaKnown RBP14.05□□□□□ -0.16
CLN6-220ENST00000637450 SNAPC3Q92966 411 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 EDA2RQ9HAV5 297 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 PALMDQ9NP74 551 aa14.05□□□□□ -0.16
CLN6-220ENST00000637450 ELF5Q9UKW6 265 aaPredicted RBP14.05□□□□□ -0.16
CLN6-220ENST00000637450 OR2A4O95047 310 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 DTYMKP23919 212 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 MECP2P51608 486 aaKnown RBP14.04□□□□□ -0.16
CLN6-220ENST00000637450 ARL6IP1Q15041 203 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 NR2C2APQ86WQ0 139 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 ATG5Q9H1Y0 275 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 ZNF430Q9H8G1 570 aaPredicted RBP14.04□□□□□ -0.16
CLN6-220ENST00000637450 TNCP24821 2201 aa14.04□□□□□ -0.16
CLN6-220ENST00000637450 TRBV9A0A0B4J1U6 114 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 MPPED1O15442 326 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 GALP22466 123 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 HAGHQ16775 308 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 CDNFQ49AH0 187 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 Q8N402 240 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 SPATA25Q9BR10 227 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 AKIP1Q9NQ31 210 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 BLOC1S6Q9UL45 172 aa14.03□□□□□ -0.16
CLN6-220ENST00000637450 IZUMO1RA6ND01 250 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 FAM223BA6NKX1 122 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms