RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	CLCC1	Q96S66	551 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ASCL2	Q99929	193 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CMSS1	Q9BQ75	279 aa	Known RBP	5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FAM103A1	Q9BTL3	118 aa	Known RBP	5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	METTL1	Q9UBP6	276 aa	Known RBP	5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB22A	Q9UL26	194 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	A3GALT2	U3KPV4	340 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022		U3KQK5	164 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022		V9GY05	133 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TRBV6-7	A0A0A0MS04	114 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TRAV1-2	A0A0B4J238	106 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022		M0R1X1	148 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ARPC1B	O15143	372 aa	Known RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FABP7	O15540	132 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DENR	O43583	198 aa	Known RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SLC25A17	O43808	307 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SAP30	O75446	220 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DIRAS3	O95661	229 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGLV2-23	P01705	113 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGHV3-11	P01762	117 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TFAP2A	P05549	437 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CRYGB	P07316	175 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FCGR3A	P08637	254 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CD3G	P09693	182 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SERPINB10	P48595	397 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IFITM2	Q01629	132 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PJVK	Q0ZLH3	352 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PLGLA	Q15195	96 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TBCE	Q15813	527 aa	Predicted RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MRGPRG-AS1	Q2M3A8	158 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ANKRD39	Q53RE8	183 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HES5	Q5TA89	166 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	UNQ5815/PRO19632	Q6UWF5	114 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	NR2C2AP	Q86WQ0	139 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR4A4P	Q8NGN8	299 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ABHD5	Q8WTS1	349 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ARPC1A	Q92747	370 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB3C	Q96E17	227 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	C5orf30	Q96GV9	206 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MS4A10	Q96PG2	267 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TSNAX	Q99598	290 aa	Known RBP	5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CABLES2	Q9BTV7	478 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CCDC90B	Q9GZT6	254 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SLA2	Q9H6Q3	261 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SCPEP1	Q9HB40	452 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF221	Q9UK13	617 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SMAD5-AS1	Q9Y6J3	95 aa		5.63	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGKV1D-8	A0A087WSZ0	117 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IFITM5	A6NNB3	132 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SRRM4	A7MD48	611 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB27B	O00194	218 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MFNG	O00587	321 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	BET1	O15155	118 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	BRI3	O95415	125 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	LY86	O95711	162 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	APOA2	P02652	100 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HSPB1	P04792	205 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR8U9	P0C7N5	309 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SMIM18	P0DKX4	95 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SPN	P16150	400 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GNB3	P16520	340 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	LGALS7	P47929	136 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR10A3	P58181	314 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TPPP2	P59282	170 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RPS16	P62249	146 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FXYD3	Q14802	87 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FAM122C	Q6P4D5	195 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022		Q6ZS49	121 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF367	Q7RTV3	350 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SBSPON	Q8IVN8	264 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR5T1	Q8NG75	326 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR10R2	Q8NGX6	335 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GRPEL2	Q8TAA5	225 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MAFIP	Q8WZ33	124 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FLYWCH2	Q96CP2	140 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SLC35D1	Q9NTN3	355 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	NDUFB11	Q9NX14	153 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SDHAF2	Q9NX18	166 aa		5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF230	Q9UIE0	474 aa	Predicted RBP	5.62	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TRDV1	A0A1B0GX56	115 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022		H3BUA1	57 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PDCD5	O14737	125 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TRGV3	P03979	118 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GP9	P14770	177 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HIST1H1D	P16402	221 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB6A	P20340	208 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GAL	P22466	123 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RPL5	P46777	297 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMEM177	Q53S58	311 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IZUMO2	Q6UXV1	221 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IL34	Q6ZMJ4	242 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	POC5	Q8NA72	575 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR10J5	Q8NHC4	309 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DDB2	Q92466	427 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR2D2	Q9H210	308 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PALMD	Q9NP74	551 aa		5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	BIRC6	Q9NR09	4857 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms