RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 RAB9AP51151 201 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 TAS2R20P59543 309 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 CBX3Q13185 183 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 FXYD3Q14802 87 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 TMEM69Q5SWH9 247 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 ANKRD13BQ86YJ7 626 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 ZNF491Q8N8L2 437 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 LFNGQ8NES3 379 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
PNKP-223ENST00000629179 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
PNKP-223ENST00000629179 COMMD3Q9UBI1 195 aa11.07□□□□□ -0.64
PNKP-223ENST00000629179 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
PNKP-223ENST00000629179 AADACP22760 399 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 FCGR2CP31995 323 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 CBX5P45973 191 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 RAB25P57735 213 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 GNB1P62873 340 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 RPL30P62888 115 aaKnown RBP11.06□□□□□ -0.64
PNKP-223ENST00000629179 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
PNKP-223ENST00000629179 CTF1Q16619 201 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 C4orf3Q8WVX3 66 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 OR5B12Q96R08 314 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 MRPS26Q9BYN8 205 aaKnown RBP11.06□□□□□ -0.64
PNKP-223ENST00000629179 GNB4Q9HAV0 340 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 NECAP2Q9NVZ3 263 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
PNKP-223ENST00000629179 SORL1Q92673 2214 aa11.06□□□□□ -0.64
PNKP-223ENST00000629179 FCGR3BO75015 233 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 SLC22A5O76082 557 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 CNIH1O95406 144 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
PNKP-223ENST00000629179 MRGPRG-AS1Q2M3A8 158 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 AKIRIN2Q53H80 203 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 ACTBL2Q562R1 376 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 OR2B11Q5JQS5 317 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 KCTD9Q7L273 389 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 SECTM1Q8WVN6 248 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 CCL28Q9NRJ3 127 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 VSIG4Q9Y279 399 aa11.05□□□□□ -0.64
PNKP-223ENST00000629179 I3L521 148 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 GABARAPO95166 117 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 DUS4LO95620 317 aaKnown RBP11.04□□□□□ -0.64
PNKP-223ENST00000629179 PPYP01298 95 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 RORCP51449 518 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
PNKP-223ENST00000629179 CDK10Q15131 360 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 VMA21Q3ZAQ7 101 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 IDO2Q6ZQW0 420 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 OR11H1Q8NG94 326 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
PNKP-223ENST00000629179 MS4A10Q96PG2 267 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 DCUN1D5Q9BTE7 237 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 TAS2R8Q9NYW2 309 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 MRPS7Q9Y2R9 242 aaKnown RBP11.04□□□□□ -0.64
PNKP-223ENST00000629179 PRELID3BQ9Y3B1 194 aa11.04□□□□□ -0.64
PNKP-223ENST00000629179 HPGDSO60760 199 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 APOA1P02647 267 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 ELK1P19419 428 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 HOXD3P31249 432 aaPredicted RBP11.03□□□□□ -0.64
PNKP-223ENST00000629179 PRSS3P35030 304 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 BRWD1-AS2P59051 145 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 FXYD4P59646 89 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 KRTAP10-11P60412 298 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 UBE2KP61086 200 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 GPR141Q7Z602 305 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 MFSD4AQ8N468 514 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 OR5T1Q8NG75 326 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 TCTEX1D2Q8WW35 142 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 CMTM3Q96MX0 182 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 HSD17B10Q99714 261 aaKnown RBP11.03□□□□□ -0.64
PNKP-223ENST00000629179 SLC5A7Q9GZV3 580 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
PNKP-223ENST00000629179 AURKAIP1Q9NWT8 199 aaPredicted RBP11.03□□□□□ -0.64
PNKP-223ENST00000629179 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
PNKP-223ENST00000629179 PRKDCP78527 4128 aaKnown RBP11.03□□□□□ -0.64
PNKP-223ENST00000629179 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 TNFSF12O43508 249 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 PMP2P02689 132 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 SAA1P0DJI8 122 aaPredicted RBP11.02□□□□□ -0.65
PNKP-223ENST00000629179 NAT1P18440 290 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 RFX2P48378 723 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 RUNX1Q01196 453 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 FHL3Q13643 280 aa11.02□□□□□ -0.65
PNKP-223ENST00000629179 PRSS8Q16651 343 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms