RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 HARBI1Q96MB7 349 aa8.39□□□□□ -1.07
SSBP4-215ENST00000625926 TMEM68Q96MH6 324 aa8.39□□□□□ -1.07
SSBP4-215ENST00000625926 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
SSBP4-215ENST00000625926 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
SSBP4-215ENST00000625926 ZNF355PQ9NSJ1 428 aa8.39□□□□□ -1.07
SSBP4-215ENST00000625926 NOTCH3Q9UM47 2321 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 LOC100506127A0A0U1RQW1 187 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 TMEM235A6NFC5 223 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 SRRM4A7MD48 611 aaKnown RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 H3BUA1 57 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 J3QRK9 145 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 SLC22A5O76082 557 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 IGHV3-11P01762 117 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 TRGV3P03979 118 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 HSPB1P04792 205 aaKnown RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 CLEC2LP0C7M8 214 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 CD36P16671 472 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 NFYAP23511 347 aaPredicted RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 DUTP33316 252 aaKnown RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 SCAND1P57086 179 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 PJVKQ0ZLH3 352 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 NEDD8Q15843 81 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 KCTD21Q4G0X4 260 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 CNIH2Q6PI25 160 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 ZNF429Q86V71 674 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 TEX45Q8NA69 505 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 POC5Q8NA72 575 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 OR5T1Q8NG75 326 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 NUDCD2Q8WVJ2 157 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 DDB2Q92466 427 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 DLX4Q92988 240 aaPredicted RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 RHOVQ96L33 236 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 PRR25Q96S07 402 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 RHBDL2Q9NX52 303 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
SSBP4-215ENST00000625926 OR2W1Q9Y3N9 320 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 ETV7Q9Y603 341 aa8.38□□□□□ -1.07
SSBP4-215ENST00000625926 IGHV4OR15-8A0A075B7B6 117 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 A0A087WW49 117 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 A0A0G2JLM5 398 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 LINC00473A8K010 186 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 SAP30O75446 220 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 HLA-DQB1P01920 261 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 SLURP1P55000 103 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 UBE2KP61086 200 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 SSBP2P81877 361 aaPredicted RBP8.37□□□□□ -1.07
SSBP4-215ENST00000625926 IDNKQ5T6J7 187 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 ZNF645Q8N7E2 425 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 OSR1Q8TAX0 266 aaPredicted RBP8.37□□□□□ -1.07
SSBP4-215ENST00000625926 RNF167Q9H6Y7 350 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 ANXA10Q9UJ72 324 aa8.37□□□□□ -1.07
SSBP4-215ENST00000625926 LSM4Q9Y4Z0 139 aaKnown RBP8.37□□□□□ -1.07
SSBP4-215ENST00000625926 TRAV18A0A075B6X5 111 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 A0A0A6YYH2 397 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 C13orf42A0A1B0GVH6 325 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 A6NJ64 397 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 SSX5O60225 188 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 TMEM127O75204 238 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 TUSC2O75896 110 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 BRI3O95415 125 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 CRYZL1O95825 349 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 PRSS8Q16651 343 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 TIMM50Q3ZCQ8 353 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 C11orf87Q6NUJ2 197 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 OR5H6Q8NGV6 325 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 PHB2Q99623 299 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 DCUN1D5Q9BTE7 237 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 RANGRFQ9HD47 186 aaPredicted RBP8.36□□□□□ -1.07
SSBP4-215ENST00000625926 DIABLOQ9NR28 239 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 RBMX2Q9Y388 322 aaKnown RBP8.36□□□□□ -1.07
SSBP4-215ENST00000625926 PRELID3BQ9Y3B1 194 aa8.36□□□□□ -1.07
SSBP4-215ENST00000625926 CREBL2O60519 120 aaPredicted RBP8.35□□□□□ -1.07
SSBP4-215ENST00000625926 FCGR3BO75015 233 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 LY86O95711 162 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 NHLRC4P0CG21 123 aaPredicted RBP8.35□□□□□ -1.07
SSBP4-215ENST00000625926 AADACP22760 399 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 ARPC4P59998 168 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 TNXAQ16473 311 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 MRGPRG-AS1Q2M3A8 158 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 ACSM6Q6P461 480 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 BEST4Q8NFU0 473 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 SLC25A38Q96DW6 304 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 OR4C12Q96R67 309 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 TINAGL1Q9GZM7 467 aaPredicted RBP8.35□□□□□ -1.07
SSBP4-215ENST00000625926 SPATA2Q9UM82 520 aa8.35□□□□□ -1.07
SSBP4-215ENST00000625926 MRPS7Q9Y2R9 242 aaKnown RBP8.35□□□□□ -1.07
SSBP4-215ENST00000625926 IGKV1D-13A0A0B4J2D9 117 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 ACTL6BO94805 426 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 IGKV1-13P0DP09 117 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 ZP3P21754 424 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 RPL30P62888 115 aaKnown RBP8.34□□□□□ -1.07
SSBP4-215ENST00000625926 CDK10Q15131 360 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 IDO2Q6ZQW0 420 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 OVCH2Q7RTZ1 564 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 HOGA1Q86XE5 327 aa8.34□□□□□ -1.07
SSBP4-215ENST00000625926 CROCCP3Q8IVE0 287 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms