RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 DHFRP00374 187 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 SERPINA3P01011 423 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 LYNP07948 512 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 ZNF688P0C7X2 276 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 IRF3Q14653 427 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 MICAQ29983 383 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 C6orf183Q5T699 404 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 OR14K1Q8NGZ2 314 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 FANK1Q8TC84 345 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 GRAMD2BQ96HH9 432 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 LINC00467Q9BRT7 94 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 JAM3Q9BX67 310 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 PIPOXQ9P0Z9 390 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 GMEB1Q9Y692 573 aa4.1□□□□□ -1.75
CDKL5-204ENST00000623364 IGKV1-12A0A0C4DH73 117 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 DPPA5A6NC42 116 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 RAB29O14966 203 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 HBZP02008 142 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 GYPBP06028 91 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 HIST1H1BP16401 226 aaKnown RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 HOXA1P49639 335 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 POLR2JP52435 117 aaKnown RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 TMED4Q7Z7H5 227 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 OR2AK2Q8NG84 335 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 RP9Q8TA86 221 aaKnown RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 ACOT12Q8WYK0 555 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 ELAC2Q9BQ52 826 aaKnown RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 DPCDQ9BVM2 203 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-204ENST00000623364 ST3GAL6Q9Y274 331 aa4.09□□□□□ -1.75
CDKL5-204ENST00000623364 MFSD2BA6NFX1 497 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 ZNF701M0R085 212 aaPredicted RBP4.08□□□□□ -1.76
CDKL5-204ENST00000623364 RGS13O14921 159 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 ACTL6BO94805 426 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 ISG15P05161 165 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 EIF4EP06730 217 aaKnown RBP4.08□□□□□ -1.76
CDKL5-204ENST00000623364 CRYGDP07320 174 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 CRYGAP11844 174 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 YAP1P46937 504 aaKnown RBP4.08□□□□□ -1.76
CDKL5-204ENST00000623364 RASSF2P50749 326 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 INSL4Q14641 139 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 RPL39P5Q59GN2 51 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 ZNF662Q6ZS27 426 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 PDPNQ86YL7 162 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 OR52D1Q9H346 318 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 NEK6Q9HC98 313 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 VAPAQ9P0L0 249 aa4.08□□□□□ -1.76
CDKL5-204ENST00000623364 NUFIP1Q9UHK0 495 aaKnown RBP4.08□□□□□ -1.76
CDKL5-204ENST00000623364 IGHV3OR16-13A0A075B7E8 117 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-204ENST00000623364 A0A096LPF7 62 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 IGHV3-74A0A0B4J1X5 117 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 FAM231BA6NCW3 169 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 AIPO00170 330 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 EBAG9O00559 213 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 CCSO14618 274 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 NUPL2O15504 423 aaKnown RBP4.07□□□□□ -1.76
CDKL5-204ENST00000623364 ST8SIA3O43173 380 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 SNX3O60493 162 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 ZNF324O75467 553 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-204ENST00000623364 APOA2P02652 100 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 TTRP02766 147 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 IDO1P14902 403 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 SPI1P17947 270 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 WFDC2Q14508 124 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 GNMTQ14749 295 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 FCN2Q15485 313 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 PRSS8Q16651 343 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 ZNF829Q3KNS6 432 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-204ENST00000623364 SPSB3Q6PJ21 355 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 OR10J6PQ8NGY7 276 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 OTOSQ8NHW6 89 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 CLUHP3Q96NS8 147 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 JPT1Q9UK76 154 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 TRAPPC2LQ9UL33 140 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 SNX12Q9UMY4 172 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 RPH3ALQ9UNE2 315 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 GTF2A1LQ9UNN4 478 aa4.07□□□□□ -1.76
CDKL5-204ENST00000623364 UTP11Q9Y3A2 253 aaKnown RBP4.07□□□□□ -1.76
CDKL5-204ENST00000623364 TRAV14DV4A0A0A6YYC5 116 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 H3BMM0 161 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 H3BS24 57 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 K7EQG2 157 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 COPEO14579 308 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 TAAR5O14804 337 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 LECT2O14960 151 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 DEFA4P12838 97 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 PRKACBP22694 351 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 OMPP47874 163 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 SLC18A1P54219 525 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 FXYD7P58549 80 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 CRMP1Q14194 572 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 TRAT1Q6PIZ9 186 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 C19orf35Q6ZS72 473 aa4.06□□□□□ -1.76
CDKL5-204ENST00000623364 CEACAM19Q7Z692 300 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms