RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ARRDC1Q8N5I2 433 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 SDHCQ99643 169 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 THAP7Q9BT49 309 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 SRRQ9GZT4 340 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 FBXL15Q9H469 300 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 RRHO14718 337 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 RAB3DO95716 219 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 CSF1P09603 554 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 TAGLNQ01995 201 aaKnown RBP11.3□□□□□ -0.6
CBWD3-217ENST00000621474 PSG5Q15238 335 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 OR2B11Q5JQS5 317 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 C10orf99Q6UWK7 81 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 Q8N402 240 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 OR4C16Q8NGL9 310 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-217ENST00000621474 RASL11BQ9BPW5 248 aa11.3□□□□□ -0.6
CBWD3-217ENST00000621474 IGHV7-81A0A0B4J1V7 117 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 FCN1O00602 326 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 RAMP3O60896 148 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 FCGR3BO75015 233 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 CRYZL1O95825 349 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 HLA-DRB1P01911 266 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 CRYGBP07316 175 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 VSIG10L2P0DP72 767 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 UCP3P55916 312 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 RPS16P62249 146 aaKnown RBP11.29□□□□□ -0.6
CBWD3-217ENST00000621474 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-217ENST00000621474 NDPQ00604 133 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 PYDC2Q56P42 97 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 TCTEX1D2Q8WW35 142 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 HARBI1Q96MB7 349 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
CBWD3-217ENST00000621474 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 CMYA5Q8N3K9 4069 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 SLC25A17O43808 307 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 SPDEFO95238 335 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 RRASP10301 218 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 KLF9Q13886 244 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-217ENST00000621474 LIN54Q6MZP7 749 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
CBWD3-217ENST00000621474 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-217ENST00000621474 GPR31O00270 319 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 SHOXO15266 292 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.6
CBWD3-217ENST00000621474 RLN1P04808 185 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 IFNA6P05013 189 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 AKAIN1P0CW23 69 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 LGALS7P47929 136 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 BAK1Q16611 211 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 ARSJQ5FYB0 599 aaPredicted RBP11.27□□□□□ -0.6
CBWD3-217ENST00000621474 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 OR51H1Q8NH63 302 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 OSR1Q8TAX0 266 aaPredicted RBP11.27□□□□□ -0.6
CBWD3-217ENST00000621474 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.6
CBWD3-217ENST00000621474 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.6
CBWD3-217ENST00000621474 PRELID3BQ9Y3B1 194 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 FBXO7Q9Y3I1 522 aa11.27□□□□□ -0.6
CBWD3-217ENST00000621474 IGF1P05019 195 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 MEF2DQ14814 521 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 STPG2Q8N412 459 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 C11orf44Q8N8P7 122 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 OR13C8Q8NGS7 320 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 TERB2Q8NHR7 220 aa11.27□□□□□ -0.61
CBWD3-217ENST00000621474 ATP6V0E1O15342 81 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-217ENST00000621474 PI3P19957 117 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 PPP5CP53041 499 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 CX3CL1P78423 397 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 CFHR3Q02985 330 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SCGB2B2Q4G0G5 96 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 PHLDA2Q53GA4 152 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SLC38A6Q8IZM9 456 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 VKORC1L1Q8N0U8 176 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SPAG16Q8N0X2 631 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 OR4S2Q8NH73 311 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 BORCS5Q969J3 196 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 OR51J1Q9H342 316 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SLC2A9Q9NRM0 540 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 SLC2A8Q9NY64 477 aa11.26□□□□□ -0.61
CBWD3-217ENST00000621474 AP4M1O00189 453 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
CBWD3-217ENST00000621474 KCNAB3O43448 404 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 CA2P00918 260 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 CD28P10747 220 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms