RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 KBTBD11O94819 623 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 Q8NFD4 153 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 OR8G5Q8NG78 346 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 OR13A1Q8NGR1 328 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 HCFC1P51610 2035 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 OR5B21A6NL26 309 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 B4DEV8 164 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 BRWD1-AS2P59051 145 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 PKIAP61925 76 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 SERF2P84101 59 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 SRSF6Q13247 344 aaKnown RBP13.44□□□□□ -0.26
DKC1-213ENST00000620277 TBC1D28Q2M2D7 210 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 SPTA1P02549 2419 aa13.44□□□□□ -0.26
DKC1-213ENST00000620277 ELOA3CA0A087WX78 387 aaPredicted RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 SLC17A3O00476 420 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 NUBP1P53384 320 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 TMEM183AQ8IXX5 376 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 HEYLQ9NQ87 328 aaPredicted RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 GNG12Q9UBI6 72 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 YKT6O15498 198 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 CER1O95813 267 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 MIC13Q5XKP0 118 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 Q6ZS49 121 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 SAXO1Q8IYX7 474 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 TECTAO75443 2155 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 MED13LQ71F56 2210 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 ACACAQ13085 2346 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 AQP7O14520 342 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 COX5AP20674 150 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 CDC34P49427 236 aaPredicted RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 CYP2G1PQ6ZSU1 146 aa13.43□□□□□ -0.26
DKC1-213ENST00000620277 GTF3AQ92664 365 aaKnown RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 LSM10Q969L4 123 aaKnown RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
DKC1-213ENST00000620277 TRAV1-1A0A0B4J248 108 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 RND2P52198 227 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 FBXW9Q5XUX1 488 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 TRIB1Q96RU8 372 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 SRD5A3Q9H8P0 318 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 EREGO14944 169 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 TIMM8AO60220 97 aaPredicted RBP13.42□□□□□ -0.26
DKC1-213ENST00000620277 OR9G9P0C7N8 305 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 TMEM45BQ96B21 275 aa13.42□□□□□ -0.26
DKC1-213ENST00000620277 PINX1Q96BK5 328 aaKnown RBP13.42□□□□□ -0.26
DKC1-213ENST00000620277 IGKV3D-15A0A087WSY6 115 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 SMPD2O60906 423 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 SELLP14151 372 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 CASP6P55212 293 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 SSX2Q16385 188 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 SGMS2Q8NHU3 365 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 SPRR3Q9UBC9 169 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 TRAPPC1Q9Y5R8 145 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 RRHO14718 337 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 MSMO1Q15800 293 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 PRAMEF5Q5TYX0 476 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 TMEM14EPQ6UXP3 125 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 DPPA3Q6W0C5 159 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 REC114Q7Z4M0 266 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 KLF14Q8TD94 323 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 PSMG3Q9BT73 122 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 TMEM147Q9BVK8 224 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 MARCH11A6NNE9 402 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 GCH1P30793 250 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 GNB1P62873 340 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 NEIL1Q96FI4 390 aaPredicted RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 COQ2Q96H96 371 aa13.41□□□□□ -0.26
DKC1-213ENST00000620277 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
DKC1-213ENST00000620277 M0R1X1 148 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 MLNRO43193 412 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 RPL29P47914 159 aaKnown RBP13.4□□□□□ -0.26
DKC1-213ENST00000620277 SPATA31B1PQ5VZV4 182 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 ZNRF1Q8ND25 227 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 ABI3Q9P2A4 366 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 POLDIP2Q9Y2S7 368 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 HRASP01112 189 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 PRB4P10163 310 aaPredicted RBP13.4□□□□□ -0.26
DKC1-213ENST00000620277 CBLN1P23435 193 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 IL3RAP26951 378 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 TRA2AQ13595 282 aaKnown RBP eCLIP13.4□□□□□ -0.264e-7■■■■□ 25.6
DKC1-213ENST00000620277 PDLIM3Q53GG5 364 aaPredicted RBP13.4□□□□□ -0.26
DKC1-213ENST00000620277 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
DKC1-213ENST00000620277 RELNP78509 3460 aa13.39□□□□□ -0.27
DKC1-213ENST00000620277 SCO2A0A1W2PP80 73 aa13.39□□□□□ -0.27
DKC1-213ENST00000620277 TMEM30CPA0ZSE6 113 aa13.39□□□□□ -0.27
DKC1-213ENST00000620277 RBFOX2O43251 390 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms