RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ACTL6BO94805 426 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 IGLV2-23P01705 113 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 CRYGBP07316 175 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 HIST1H1DP16402 221 aaKnown RBP9.14□□□□□ -0.95
UPF3B-204ENST00000619445 DTYMKP23919 212 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 UBE2KP61086 200 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 ARFRP1Q13795 201 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 KLF5Q13887 457 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-204ENST00000619445 HES5Q5TA89 166 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 OR5T1Q8NG75 326 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 OR9G4Q8NGQ1 327 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 SNAPC3Q92966 411 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 PHB2Q99623 299 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 PALMDQ9NP74 551 aa9.14□□□□□ -0.95
UPF3B-204ENST00000619445 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
UPF3B-204ENST00000619445 FAM223BA6NKX1 122 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 TRIM64CA6NLI5 447 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 RAB27BO00194 218 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 AIREO43918 545 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 MRPS14O60783 128 aaKnown RBP9.13□□□□□ -0.95
UPF3B-204ENST00000619445 OR2A4O95047 310 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 GSTT2P0CG29 244 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 GSTT2BP0CG30 244 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 LYL1P12980 280 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 RAB3BP20337 219 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 IGSF11Q5DX21 431 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 LCN12Q6JVE5 192 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 ZNF343Q6P1L6 599 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 OVCH2Q7RTZ1 564 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 GTSCR1Q86UQ5 136 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 SLC25A42Q86VD7 318 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 FAM223AQ8IWN6 122 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 OR2K2Q8NGT1 345 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 TM2D3Q9BRN9 247 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 NDUFB11Q9NX14 153 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 COA4Q9NYJ1 87 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 PEMTQ9UBM1 199 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 NKX1-2Q9UD57 310 aaPredicted RBP9.13□□□□□ -0.95
UPF3B-204ENST00000619445 MRPS7Q9Y2R9 242 aaKnown RBP9.13□□□□□ -0.95
UPF3B-204ENST00000619445 KCNK7Q9Y2U2 307 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 PRELID3BQ9Y3B1 194 aa9.13□□□□□ -0.95
UPF3B-204ENST00000619445 TRDV1A0A1B0GX56 115 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 MPPED1O15442 326 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 IGHV4-30-4P0DP06 118 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 GNB3P16520 340 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 CD36P16671 472 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 DUTP33316 252 aaKnown RBP9.12□□□□□ -0.95
UPF3B-204ENST00000619445 PJVKQ0ZLH3 352 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 PRSS8Q16651 343 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 RPEL1Q2QD12 228 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 MMD2Q8IY49 270 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 H1FOOQ8IZA3 346 aaPredicted RBP9.12□□□□□ -0.95
UPF3B-204ENST00000619445 Q8N402 240 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 BVESQ8NE79 360 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 DCSTAMPQ9H295 470 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 ANKRD34BA5PLL1 514 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 TUSC2O75896 110 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 CRYZL1O95825 349 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 LINC00205P59089 165 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 SSBP2P81877 361 aaPredicted RBP9.12□□□□□ -0.95
UPF3B-204ENST00000619445 TNXAQ16473 311 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 LAX1Q8IWV1 398 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 ZNF645Q8N7E2 425 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 VSTM2AQ8TAG5 236 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 SRSF12Q8WXF0 261 aaKnown RBP9.12□□□□□ -0.95
UPF3B-204ENST00000619445 DDB2Q92466 427 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 ISOC1Q96CN7 298 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 SPATA25Q9BR10 227 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 C19orf73Q9NVV2 129 aa9.12□□□□□ -0.95
UPF3B-204ENST00000619445 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 A0A075B6Q4 140 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 IFNA6P05013 189 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 MAP2K4P45985 399 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 GABARAPL2P60520 117 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 DYRK1AQ13627 763 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 CDK10Q15131 360 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 Q8N1Y9 231 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 NECAP1Q8NC96 275 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 ADAD2Q8NCV1 583 aaKnown RBP9.11□□□□□ -0.95
UPF3B-204ENST00000619445 ACOT12Q8WYK0 555 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 AIFM2Q9BRQ8 373 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 ATG5Q9H1Y0 275 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 OR2W1Q9Y3N9 320 aa9.11□□□□□ -0.95
UPF3B-204ENST00000619445 RYR3Q15413 4870 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 SRRM4A7MD48 611 aaKnown RBP9.1□□□□□ -0.95
UPF3B-204ENST00000619445 NOTOA8MTQ0 251 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 FGF9P31371 208 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-204ENST00000619445 OR10A3P58181 314 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 ATP5G2Q06055 141 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 HACD4Q5VWC8 232 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 CNIH2Q6PI25 160 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 KCTD9Q7L273 389 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms